Superfamily : 56821 [ Prismane protein-like ]
Class : Multi-domain proteins (alpha and beta)
Fold : Prismane protein-like
# of Members : 3
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1gnla-  (   1 )    snamfcYQcQeTvgnkGctqvGvc--------gkkpeTAaLqdALIyV--
d2yivx-  (   2 )                      arqnlk--------StDrAvqqMldkAkregi
d3i01m-  (   2 )                      tdFdkiFegaipegkePvaLFreVyhGAit--
                                                       aaaaaaaaaaaaa  

                             60        70        80        90        100 
d1gnla-  (  41 )    --TKGLGqIA----trLraegk---------------------------a
d2yivx-  (  26 )    qtvWdryeamkpqcgfgetglccrhclqGpcrinpfgdepkvGic---ga
d3i01m-  (  32 )    --aTsyAeil----Lnqairtygp---dhpVgYpdTayyLPVIrCFsgee
                      aaaaaaaa    aaaaa                               

                             110       120       130       140       150 
d1gnla-  (  58 )    VdhriDrlVTGNLFATIt-----NANfdddiLAerVrmTCaaKkelaasL
d2yivx-  (  73 )    taevivARglDrsiAaGA-----ag--HSgHAkhlAhtlkkAvqg-----
d3i01m-  (  73 )    VkkLgdLppILnrkraqVspvlnfenARlAGEATWYAaEIIEALrYlkyk
                          aaaaaaaaa             aaaaaaaaaaaaaaa       

                             160       170       180       190       200 
d1gnla-  ( 103 )    tdksgLsdAAlwease-ksaMlakAgtVgVmatt--------dddvrSLr
d2yivx-  ( 111 )    -------kAasYmikd-rtklhsiAk---rlgiptegq----kdediAle
d3i01m-  ( 123 )    pdepllpppwTgFIgDpvVRrFGikMVdwtIPGEAiILgrAkdskaLakI
                                     aaaa aaa                  aaaaaaa

                             210       220       230       240       250 
d1gnla-  ( 144 )    wLITFGLKG-----MAAYAKhAdvLgkhe---------------nsLdaF
d2yivx-  ( 146 )    vAkaAlaDF-----hekdtpvlWvttvlppsRvkvlsa-hgliPaGidhE
d3i01m-  ( 173 )    VkeLMGmGFMLFICdeAVeQLlee-----nvkLgidyIAYPLGnfTqiVH
                    aaaaaa               aa                         aa

                             260       270       280       290       300 
d1gnla-  ( 174 )    MQeALakTld--dsl-svadLvaLtleTGkfG--------vsAMalLdaA
d2yivx-  ( 190 )    iaeimhrtsm--gcdadaqnlllGGlrCSlAD--------lAGCyMGtDl
d3i01m-  ( 218 )    AANYaLRAGMMFGgvtpgareeQRdYQrrrIrAFVLYLgehdmvkTAaAF
                    aaaaaaa            aaaaaaaaaaa            aaaaaaaa

                             310       320       330       340       350 
d1gnla-  ( 213 )    NtgtYghPeitkVn----IgvgsnpGILISGhdLrDLeMLLkqTegt---
d2yivx-  ( 230 )    ADilFgtPapvvteSnlGvlkadAvnvAvHGHnPvlSDiivsvSkeMene
d3i01m-  ( 268 )    GAIFTGFPVITDqpLpedkqIpdWFfsve------dydkIVqiAmetRgI
                    aaaa      b              bb            aaaaa      

                             360       370       380       390       400 
d1gnla-  ( 256 )    -------gVDVYTHSEMLPAhYYpaFkkyahFkGNYGnAWwkQkeeFesF
d2yivx-  ( 280 )    AraagAtginvvGiCCtGnEvlMRhg-------ipACtHSvSqEMAMitg
d3i01m-  ( 312 )    kltkikldLpInfgPAFegEsIrkg-------dMyVEMGg---------n
                                                                      

                             410       420       430       440       450 
d1gnla-  ( 299 )    nG-PVLLTTNcLVpPk----dsYkdrVYTTg------iVgftgCkhipge
d2yivx-  ( 323 )    AlDAMilDYqciqpsvAtiaectgttvittme-----mskitgAthvnFa
d3i01m-  ( 346 )    rtpAFELVrtvs----eseItdgkievigpdIdqipegsklpLGILVdIy
                        bbb                   bb                bb    

                             460       470       480       490       500 
d1gnla-  ( 338 )    iGehK-dFsaIiahAktc-------paPteiesgeiiGGFAhnqvlalad
d2yivx-  ( 368 )    eeaAvenAkqilrlAidtfkrrkgkpveiPniktkvvAGFSteaiinAls
d3i01m-  ( 392 )    GrkMqadFEgVLErrIhdFINyGegLwHtgqrn-iNwLrVskdAvakgFr
                            aaaaaa a                  bbbb   aaaaaa   

                             510       520       530       540       550 
d1gnla-  ( 380 )    ---------kVidavksgaIkkFVvMAgcDGra-k-sRsYYtdFAegLpk
d2yivx-  ( 418 )    klnandplkPlidnvvngnirGvClFagcnnvkvp-qDqnFttiArkllk
d3i01m-  ( 441 )    FknYGeILvakMkeefpaIVdrVqVtIFTdeakVkeymevArekYkerdd
                             aaaaaa       bbb              aaaaaaaa   

                             560       570       580       590       600 
d1gnla-  ( 419 )    ----------dTVIlTAGCAKYrYnklnLg----------dig-------
d2yivx-  ( 467 )    ---------qnvlvvAtGcGAGAlMRhGFMdpanvdel--Cgdglkavlt
d3i01m-  ( 491 )    rmrgltDetvdtFYScvlcqsFApnHVcIVTPeRvgLcgavswldAkAsy
                                bbbb                                  

                             610       620       630       640       650 
d1gnla-  ( 442 )    ---------------------------------gipRvLDAGQCNDSySL
d2yivx-  ( 506 )    aiGeangl-----------------------ggplPPvlHMGScvDnSRA
d3i01m-  ( 541 )    einhagpNqpIpkegeidpikGIWksVndyLytaSnrnleqVCLYTLmen
                                                                      

                             660       670       680       690       700 
d1gnla-  ( 459 )    avIalkLkevfgle-dvndLpIvyNIA-W--YEQKAVIvlLAlLslgVkn
d2yivx-  ( 533 )    valvaalAnrlgv--dldrlPvvASaAEA--mheKavAiGtWAvtiGl-P
d3i01m-  ( 591 )    PMTSCGCFe-AIMAiLpeCnGIMITtrdhagmTPSgmtFStLAgmIGGgt
                                    333  bbbbb            aaaaaaa     

                             710       720       730       740       750 
d1gnla-  ( 505 )    IhLGPtlPaFlspnVakvlve----qfn--IggitspqdDlkaff     
d2yivx-  ( 578 )    tHiGvlppitgSlpvtqiltssvkditgGyFiveldpetAAdkllaAine
d3i01m-  ( 640 )    qtpGfMGIGrt-YIvskkFIsadggIaRIVWMP----ksLkdfLhdeFvr
                                                         aaaaaa       

                             760       770       780       790   
d1gnla-                                                          
d2yivx-  ( 628 )    rRaglglpw                                    
d3i01m-  ( 685 )    RSveeglgedFidkIADetigttvdeIlpyLeekgHpAltmdpIm
                                                                 

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Hybrid cluster protein (prismane protein)Hybrid cluster protein (prismane protein)Desulfovibrio desulfuricans [TaxId: 876]view
Ni-containing carbon monoxide dehydrogenaseCarbon monoxide dehydrogenaseCarboxydothermus hydrogenoformans [TaxId: 129958]view
automated matchesAcetyl-CoA synthaseMoorella thermoacetica [TaxId: 1525]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

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S N A M F C Y Q C Q E T V G N K G C T Q V G V C - - - - - - - - G K K P E T A A L Q D A L I Y V - - - - T K G L G Q I A - - - - T R L R A E G K - - - - - - - - - - - - - - - - - - - - - - - - - - - A V D H R I D R L V T G N L F A T I T - - - - - N A N F D D D I L A E R V R M T C A A K K E L A A S L T D K S G L S D A A L W E A S E - K S A M L A K A G T V G V M A T T - - - - - - - - D D D V R S L R W L I T F G L K G - - - - - M A A Y A K H A D V L G K H E - - - - - - - - - - - - - - - N S L D A F M Q E A L A K T L D - - D S L - S V A D L V A L T L E T G K F G - - - - - - - - V S A M A L L D A A N T G T Y G H P E I T K V N - - - - I G V G S N P G I L I S G H D L R D L E M L L K Q T E G T - - - - - - - - - - G V D V Y T H S E M L P A H Y Y P A F K K Y A H F K G N Y G N A W W K Q K E E F E S F N G - P V L L T T N C L V P P K - - - - D S Y K D R V Y T T G - - - - - - I V G F T G C K H I P G E I G E H K - D F S A I I A H A K T C - - - - - - - P A P T E I E S G E I I G G F A H N Q V L A L A D - - - - - - - - - K V I D A V K S G A I K K F V V M A G C D G R A - K - S R S Y Y T D F A E G L P K - - - - - - - - - - D T V I L T A G C A K Y R Y N K L N L G - - - - - - - - - - D I G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G I P R V L D A G Q C N D S Y S L A V I A L K L K E V F G L E - D V N D L P I V Y N I A - W - - Y E Q K A V I V L L A L L S L G V K N I H L G P T L P A F L S P N V A K V L V E - - - - Q F N - - I G G I T S P Q D D L K A F F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - A R Q N L K - - - - - - - - S T D R A V Q Q M L D K A K R E G I Q T V W D R Y E A M K P Q C G F G E T G L C C R H C L Q G P C R I N P F G D E P K V G I C - - - G A T A E V I V A R G L D R S I A A G A - - - - - A G - - H S G H A K H L A H T L K K A V Q G - - - - - - - - - - - - K A A S Y M I K D - R T K L H S I A K - - - R L G I P T E G Q - - - - K D E D I A L E V A K A A L A D F - - - - - H E K D T P V L W V T T V L P P S R V K V L S A - H G L I P A G I D H E I A E I M H R T S M - - G C D A D A Q N L L L G G L R C S L A D - - - - - - - - L A G C Y M G T D L A D I L F G T P A P V V T E S N L G V L K A D A V N V A V H G H N P V L S D I I V S V S K E M E N E A R A A G A T G I N V V G I C C T G N E V L M R H G - - - - - - - I P A C T H S V S Q E M A M I T G A L D A M I L D Y Q C I Q P S V A T I A E C T G T T V I T T M E - - - - - M S K I T G A T H V N F A E E A A V E N A K Q I L R L A I D T F K R R K G K P V E I P N I K T K V V A G F S T E A I I N A L S K L N A N D P L K P L I D N V V N G N I R G V C L F A G C N N V K V P - Q D Q N F T T I A R K L L K - - - - - - - - - Q N V L V V A T G C G A G A L M R H G F M D P A N V D E L - - C G D G L K A V L T A I G E A N G L - - - - - - - - - - - - - - - - - - - - - - - G G P L P P V L H M G S C V D N S R A V A L V A A L A N R L G V - - D L D R L P V V A S A A E A - - M H E K A V A I G T W A V T I G L - P T H I G V L P P I T G S L P V T Q I L T S S V K D I T G G Y F I V E L D P E T A A D K L L A A I N E R R A G L G L P W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - T D F D K I F E G A I P E G K E P V A L F R E V Y H G A I T - - - - A T S Y A E I L - - - - L N Q A I R T Y G P - - - D H P V G Y P D T A Y Y L P V I R C F S G E E V K K L G D L P P I L N R K R A Q V S P V L N F E N A R L A G E A T W Y A A E I I E A L R Y L K Y K P D E P L L P P P W T G F I G D P V V R R F G I K M V D W T I P G E A I I L G R A K D S K A L A K I V K E L M G M G F M L F I C D E A V E Q L L E E - - - - - N V K L G I D Y I A Y P L G N F T Q I V H A A N Y A L R A G M M F G G V T P G A R E E Q R D Y Q R R R I R A F V L Y L G E H D M V K T A A A F G A I F T G F P V I T D Q P L P E D K Q I P D W F F S V E - - - - - - D Y D K I V Q I A M E T R G I K L T K I K L D L P I N F G P A F E G E S I R K G - - - - - - - D M Y V E M G G - - - - - - - - - N R T P A F E L V R T V S - - - - E S E I T D G K I E V I G P D I D Q I P E G S K L P L G I L V D I Y G R K M Q A D F E G V L E R R I H D F I N Y G E G L W H T G Q R N - I N W L R V S K D A V A K G F R F K N Y G E I L V A K M K E E F P A I V D R V Q V T I F T D E A K V K E Y M E V A R E K Y K E R D D R M R G L T D E T V D T F Y S C V L C Q S F A P N H V C I V T P E R V G L C G A V S W L D A K A S Y E I N H A G P N Q P I P K E G E I D P I K G I W K S V N D Y L Y T A S N R N L E Q V C L Y T L M E N P M T S C G C F E - A I M A I L P E C N G I M I T T R D H A G M T P S G M T F S T L A G M I G G G T Q T P G F M G I G R T - Y I V S K K F I S A D G G I A R I V W M P - - - - K S L K D F L H D E F V R R S V E E G L G E D F I D K I A D E T I G T T V D E I L P Y L E E K G H P A L T M D P I M

 

 

 

 

 

Member Chain UniProtKB GO term
d1gnla_ A Q01770 GO:0003824
d1gnla_ A Q01770 GO:0004601
d1gnla_ A Q01770 GO:0005737
d1gnla_ A Q01770 GO:0016491
d1gnla_ A Q01770 GO:0016661
d1gnla_ A Q01770 GO:0042542
d1gnla_ A Q01770 GO:0046872
d1gnla_ A Q01770 GO:0050418
d1gnla_ A Q01770 GO:0051536
d1gnla_ A Q01770 GO:0051539
d1gnla_ A Q01770 GO:0098869
d1gnla_ A Q01770 GO:0003824
d1gnla_ A Q01770 GO:0004601
d1gnla_ A Q01770 GO:0005737
d1gnla_ A Q01770 GO:0016491
d1gnla_ A Q01770 GO:0016661
d1gnla_ A Q01770 GO:0042542
d1gnla_ A Q01770 GO:0046872
d1gnla_ A Q01770 GO:0050418
d1gnla_ A Q01770 GO:0051536
d1gnla_ A Q01770 GO:0051539
d1gnla_ A Q01770 GO:0098869