Superfamily : 56815 [ Sec1/munc18-like (SM) proteins ]
Class : Multi-domain proteins (alpha and beta)
Fold : Sec1/munc18-like (SM) proteins
# of Members : 2
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1mqsa-  (  11 )    dislrd-QisaIlkLflNdln--ndnttitddifnqqiiwKVLILdikSt
d3c98a-  (   4 )     igLkavVgekImhdVIkkvkkk--------------gewKVLVVDqlSm
                            aaaaa                           bbbbb aaaa

                             60        70        80        90        100 
d1mqsa-  (  64 )    aTIssVLv-ndLlkAgItvhslIkqdRsplpdvpAIYfVsptkeNIdiIV
d3c98a-  (  39 )    rMlssCCkmtdImtegItivedInkrReplpsleAVYLItpsekSVhsLi
                    aaa      aaa    bbbbbb            bbbbb   aaaaaaaa

                             110       120       130       140       150 
d1mqsa-  ( 114 )    nDLks---dkYseFyInFtssLprnlledLaq-qvsitgksdkikqvydq
d3c98a-  (  89 )    sDFkdpptakYrAAhVFFTdsCpdaLfneLvksrAak-----viktlteI
                    a            bbbbb     aaaaaaaa            bbbbbb 

                             160       170       180       190       200 
d1mqsa-  ( 160 )    yLdFiVtEpeLFSLeisnAYltLndpt--teitglCanIAdgLfNTVlti
d3c98a-  ( 134 )    nIAFLPyEsqVYSLdsadSFqSFYSphkaqmknpiLerLAeqIATLCaTl
                        bb     bb     aaaaaa        aaaaaaaaaaaaaaaaaa

                             210       220       230       240       250 
d1mqsa-  ( 211 )    nsiPIIRAakg-gpAeiIAekLGtkLrdfvint-----nse--rGVLIIL
d3c98a-  ( 184 )    kEyPaVRyrgeykDNalLAqlIqdkLdaykaddptMGegpdkarSqLLIL
                        bbbb     aaaaaaaaaaaaaaaaaa              bbbbb

                             260       270       280       290       300 
d1mqsa-  ( 265 )    dRnidFaS-FsHswIYQC-VfdiFL--sntVtipa--------tkydIep
d3c98a-  ( 234 )    DRGFDpsSPVLHeLtFQAMSyDlLpIendvYkyetsgigearvkevlLde
                    b333                                              

                             310       320       330       340       350 
d1mqsa-  ( 324 )    ndfFw-eNshlpFpeAaenveaalnt-yeeaaeittv----vklpeltak
d3c98a-  ( 284 )    dDdlWiaLRhkhiaeVsqeVtrsLkdfssskrMmrdlsqmlkkmpqyqke
                                aaaaaaaaaaaaaa   a                 aaa

                             360       370       380       390       400 
d1mqsa-  ( 394 )    kntIdtH-nIFaallsqlsksldtFfevEqd--pgs---------ttrsF
d3c98a-  ( 341 )    LskysTHlhLAedCmkhyqgtvdkLCrvEQdLamgtdaegekikdpmraI
                    aaaaaa   aaaaaaaa     aaaaaa                      

                             410       420       430       440       450 
d1mqsa-  ( 436 )    ldildgktnnleD-LRSFIVlyLtSttglpdfvqnVenyFk--endydiA
d3c98a-  ( 391 )    vpILldanVstydkIRIILLYIflknGiteenLnkLiqhAqIppedseII
                                   aaaaaaaaa       aaaaaaaaa          

                             460       470       480       490       500 
d1mqsa-  ( 487 )    LyVykLre----------fqlsnsLqnsgtgggvgslisgIlpktipITN
d3c98a-  ( 441 )    tNMahLgVpIvtdstlrrrskperkeriseq------tyqlsrWtPiIkd
                                                                  aaaa

                             510       520       530       540       550 
d1mqsa-  ( 561 )    VVdAIdPlnSsqkNletTdsylyIdPkitgtrprqsYnkslVFVVGGGnY
d3c98a-  ( 485 )    IMedTIedkLdtk------hypyis-------trrsgPrLIIFILGGVsL
                    aaaa                                   bbbbbb    a

                             560       570       580       590   
d1mqsa-  ( 617 )    lEYqnLqwAhsqlhnpkkVYGSTaittPaeflnEIsrLgasn-ss
d3c98a-  ( 548 )    NEMrCAyeVtqangkWeVLIGSThiLtpqkLLdtLkkLnktdeei
                    aaaaaa              bb     aaaaaaaa          

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Sly1P proteinSec1/munc18-like (SM) proteinsBaker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]view
Neuronal Sec1, NSec1Sec1/munc18-like (SM) proteinsNorway rat (Rattus norvegicus) [TaxId: 10116]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590
D I S L R D - Q I S A I L K L F L N D L N - - N D N T T I T D D I F N Q Q I I W K V L I L D I K S T A T I S S V L V - N D L L K A G I T V H S L I K Q D R S P L P D V P A I Y F V S P T K E N I D I I V N D L K S - - - D K Y S E F Y I N F T S S L P R N L L E D L A Q - Q V S I T G K S D K I K Q V Y D Q Y L D F I V T E P E L F S L E I S N A Y L T L N D P T - - T E I T G L C A N I A D G L F N T V L T I N S I P I I R A A K G - G P A E I I A E K L G T K L R D F V I N T - - - - - N S E - - R G V L I I L D R N I D F A S - F S H S W I Y Q C - V F D I F L - - S N T V T I P A - - - - - - - - T K Y D I E P N D F F W - E N S H L P F P E A A E N V E A A L N T - Y E E A A E I T T V - - - - V K L P E L T A K K N T I D T H - N I F A A L L S Q L S K S L D T F F E V E Q D - - P G S - - - - - - - - - T T R S F L D I L D G K T N N L E D - L R S F I V L Y L T S T T G L P D F V Q N V E N Y F K - - E N D Y D I A L Y V Y K L R E - - - - - - - - - - F Q L S N S L Q N S G T G G G V G S L I S G I L P K T I P I T N V V D A I D P L N S S Q K N L E T T D S Y L Y I D P K I T G T R P R Q S Y N K S L V F V V G G G N Y L E Y Q N L Q W A H S Q L H N P K K V Y G S T A I T T P A E F L N E I S R L G A S N - S S
- I G L K A V V G E K I M H D V I K K V K K K - - - - - - - - - - - - - - G E W K V L V V D Q L S M R M L S S C C K M T D I M T E G I T I V E D I N K R R E P L P S L E A V Y L I T P S E K S V H S L I S D F K D P P T A K Y R A A H V F F T D S C P D A L F N E L V K S R A A K - - - - - V I K T L T E I N I A F L P Y E S Q V Y S L D S A D S F Q S F Y S P H K A Q M K N P I L E R L A E Q I A T L C A T L K E Y P A V R Y R G E Y K D N A L L A Q L I Q D K L D A Y K A D D P T M G E G P D K A R S Q L L I L D R G F D P S S P V L H E L T F Q A M S Y D L L P I E N D V Y K Y E T S G I G E A R V K E V L L D E D D D L W I A L R H K H I A E V S Q E V T R S L K D F S S S K R M M R D L S Q M L K K M P Q Y Q K E L S K Y S T H L H L A E D C M K H Y Q G T V D K L C R V E Q D L A M G T D A E G E K I K D P M R A I V P I L L D A N V S T Y D K I R I I L L Y I F L K N G I T E E N L N K L I Q H A Q I P P E D S E I I T N M A H L G V P I V T D S T L R R R S K P E R K E R I S E Q - - - - - - T Y Q L S R W T P I I K D I M E D T I E D K L D T K - - - - - - H Y P Y I S - - - - - - - T R R S G P R L I I F I L G G V S L N E M R C A Y E V T Q A N G K W E V L I G S T H I L T P Q K L L D T L K K L N K T D E E I

 

 

 

 

 

Member Chain UniProtKB GO term
d1mqsa_ A P22213 GO:0000139
d1mqsa_ A P22213 GO:0000149
d1mqsa_ A P22213 GO:0005515
d1mqsa_ A P22213 GO:0005737
d1mqsa_ A P22213 GO:0005783
d1mqsa_ A P22213 GO:0005829
d1mqsa_ A P22213 GO:0006886
d1mqsa_ A P22213 GO:0006888
d1mqsa_ A P22213 GO:0006890
d1mqsa_ A P22213 GO:0015031
d1mqsa_ A P22213 GO:0016020
d1mqsa_ A P22213 GO:0016192
d1mqsa_ A P22213 GO:0019905
d1mqsa_ A P22213 GO:0030134
d1mqsa_ A P22213 GO:0035543
d1mqsa_ A P22213 GO:0046578
d1mqsa_ A P22213 GO:0048280
d1mqsa_ A Q01590 GO:0000139
d1mqsa_ A Q01590 GO:0000149
d1mqsa_ A Q01590 GO:0005515
d1mqsa_ A Q01590 GO:0005737
d1mqsa_ A Q01590 GO:0005783
d1mqsa_ A Q01590 GO:0005829
d1mqsa_ A Q01590 GO:0006886
d1mqsa_ A Q01590 GO:0006888
d1mqsa_ A Q01590 GO:0006890
d1mqsa_ A Q01590 GO:0015031
d1mqsa_ A Q01590 GO:0016020
d1mqsa_ A Q01590 GO:0016192
d1mqsa_ A Q01590 GO:0019905
d1mqsa_ A Q01590 GO:0030134
d1mqsa_ A Q01590 GO:0035543
d1mqsa_ A Q01590 GO:0046578
d1mqsa_ A Q01590 GO:0048280