solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
disulphide bond: cedilla
positive phi: italic x
10 20 30 40 50
d1bdfa2 ( 53 ) gCaVteVeIdgVlheystkeGVqedIleILlnLkgLaVrVq--------
d1twfc2 ( 42 ) ptLAIdsVevetn--------tTvladefIahrLglIpLqsmdIeqLeys
d4c2mc2 ( 76 ) psVAAeyVyffnN--------tSviqdevLahrIglVpLkV-dpdmLtwV
bbbbbbbb aaaaaaaaa bb
60 70 80 90 100
d1bdfa2 ( 94 ) -----------gkdeviLtLnksg------------------igpVtAad
d1twfc2 ( 84 ) rdCfc--edhcdkCSVvLtLqafGese--------------sttnVySkd
d4c2mc2 ( 117 ) dsnlpddekftdenTIvLsLnvkCtrnpdapkgstdpkelynnAhVyArd
bbbbbbbb bbb333
110 120 130 140 150
d1bdfa2 ( 115 ) Ith--dg---------dVeivk-----pqhvIChLtdenAsIsMrIkVqr
d1twfc2 ( 118 ) Lvivs--nlm---grnIGhpiiqdkegngvlICkL-rkgqeLkLtCVAkk
d4c2mc2 ( 167 ) LkfepqgrQsttFadcpVvPad-----pdilLAkL-rpgqeIsLkAhCiL
bb bbbb bbbbbbbbbb
160
d1bdfa2 ( 149 ) grgyvpasigrllVdAcys
d1twfc2 ( 162 ) GiakehakWgp
d4c2mc2 ( 211 ) giggdhakFsp
| Domain ID | Name | Family | Source | Domain | STRING-DB |
|---|---|---|---|---|---|
| RNA polymerase alpha subunit | Insert subdomain of RNA polymerase alpha subunit | Escherichia coli [TaxId: 562] |  | view | |
| RPB3 | Insert subdomain of RNA polymerase alpha subunit | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view | |
| RNA polymerases I and III subunit AC40 | Insert subdomain of RNA polymerase alpha subunit | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view |
No outliers
| 10 | 20 | 30 | 40 | 50 | 60 | 70 | 80 | 90 | 100 | 110 | 120 | 130 | 140 | 150 | 160 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| - | G | C | A | V | T | E | V | E | I | D | G | V | L | H | E | Y | S | T | K | E | G | V | Q | E | D | I | L | E | I | L | L | N | L | K | G | L | A | V | R | V | Q | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | G | K | D | E | V | I | L | T | L | N | K | S | G | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | I | G | P | V | T | A | A | D | I | T | H | - | - | D | G | - | - | - | - | - | - | - | - | - | D | V | E | I | V | K | - | - | - | - | - | P | Q | H | V | I | C | H | L | T | D | E | N | A | S | I | S | M | R | I | K | V | Q | R | G | R | G | Y | V | P | A | S | I | G | R | L | L | V | D | A | C | Y | S |
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