PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1hwla2  ( 442 )    prpne---eCflsdaEiiqlvnak-hipaykLetlIetherGVsIRrqll
d4i6ya1  (   3 )     ldSrLpafrnlspaarldhIGqllgLs---------------hddvsll
                                 aaaaaaaaaa                    aaaaaaa

                             60        70        80        90        100 
d1hwla2  ( 500 )    skklsepsslqylpyrdynYslvmgaccenViGympipvgvAGpLcLdek
d4i6ya1  (  37 )    ana------------galpmdiang-mienvigtfelpyavAsnFqingr
                    a                  aaaa               bbbb   bb  b

                             110       120       130       140       150 
d1hwla2  ( 550 )    efqVPMAttegcLvasTnrGCrAIglGggAsSrvladksVvCeavIpakv
d4i6ya1  (  74 )    dvLVPLvveepsIvaaAsyMAklArangGFtTsSsaprlArAqVrItpqq
                    b  bbbb     aaaaaaaaaaaaa     bbbb    bbbbbbbb aaa

                             160       170       180       190       200 
d1hwla2  ( 717 )    VrevLkt---tTeaMievNinkNlvgsamagsiggynAhAanIVtAIYiA
d4i6ya1  ( 234 )    LetaefsGeaVIegIldayaf-AavdpyrAatH---NkgIMnGIdPLIvA
                    a          aaaaaaaaaa a a aaa          aaaaaaaaaaa

                             210       220       230       240       250 
d1hwla2  ( 764 )    CgQdaaq-nvgSsn---------CiTlMeasgptnedLyIsCtMpsIeIg
d4i6ya1  ( 280 )    TgndwraVeagAhayAcrsghygSLTtWekdn--nghLvGtLeMp-MpVg
                            aaaa             bbbbb       bbbbbbb      

                             260       270       280       290       300 
d1hwla2  ( 804 )    TvgggTn-llpqqacLqmLgVqgackdnpgenarqLArIVCGTVMAGELS
d4i6ya1  ( 327 )    lvggaTkthplAqLSlrILgVk---------taqaLAeIAVAVGLAQNLG
                             aaaaaaaaa              aaaaaaaaaaaaaaaaaa

                             
d1hwla2  ( 853 )    lMAalAag 
d4i6ya1  ( 368 )    aMralaTeg
                    aaaaaaa

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d1hwla2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1hwla2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Substrate-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	Human (Homo sapiens) [TaxId: 9606]		view
d4i6ya1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d4i6ya1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Substrate-binding domain of HMG-CoA reductase	Substrate-binding domain of HMG-CoA reductase	Pseudomonas mevalonii [TaxId: 32044]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term
d1hwla2	A	P04035	GO:0004420
d1hwla2	A	P04035	GO:0004420
d1hwla2	A	P04035	GO:0005789
d1hwla2	A	P04035	GO:0005789
d1hwla2	A	P04035	GO:0008299
d1hwla2	A	P04035	GO:0008299
d1hwla2	A	P04035	GO:0015936
d1hwla2	A	P04035	GO:0015936
d1hwla2	A	P04035	GO:0016616
d1hwla2	A	P04035	GO:0016616
d1hwla2	A	P04035	GO:0050661
d1hwla2	A	P04035	GO:0050661
d1hwla2	A	P04035	GO:0004420
d1hwla2	A	P04035	GO:0004420
d1hwla2	A	P04035	GO:0005789
d1hwla2	A	P04035	GO:0005789
d1hwla2	A	P04035	GO:0008299
d1hwla2	A	P04035	GO:0008299
d1hwla2	A	P04035	GO:0015936
d1hwla2	A	P04035	GO:0015936
d1hwla2	A	P04035	GO:0016616
d1hwla2	A	P04035	GO:0016616
d1hwla2	A	P04035	GO:0050661
d1hwla2	A	P04035	GO:0050661

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