BASE   PART 1   PART 2   PART 3  
Superfamily : 56399 [ ADP-ribosylation ]
Class : Alpha and beta proteins (a+b)
Fold : ADP-ribosylation
# of Members : 6
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1f0la2  (   1 )                                                      
d1s21a-  (  29 )                                                      
d1wfxa-  (   3 )        vrlsktLagILrhhpgrygVrLtreGWArvseVVegLrkag-wswV
d2o0qa1  (   2 )                                                      
d3ki2a1  ( 427 )                                                      
d6e3aa-  (   3 )    lidyskLskeVayALrhaPweygLeLdaeGwVdInqLlssLhecekWkkV
                                                                      

                             60        70        80        90        100 
d1f0la2  (   1 )                                      gaddVvdss-------
d1s21a-  (  29 )                      psrfvgqYtltsIhqLsseerenFldahdPmr
d1wfxa-  (  48 )    eewhIvgvAlhDpkgrYelrn--geIRAryGHsi--pVnve---------
d2o0qa1  (   2 )                                                      
d3ki2a1  ( 427 )                    AvItp--qgvtnwtyqeLeathqaltr-------
d6e3aa-  (  53 )    sehdLhvMieksdkkrYeIsn--gkIrALyGHsipqrIiKe---------
                                                                      

                             110       120       130       140       150 
d1f0la2  (  10 )    kSfvmenFsSyhGTkpgyVdsiqkgIqkpsgtqgnydddwkGFySTdnky
d1s21a-  (  61 )    vydLnsetsVyrttqreyVr---ngyatGnpnsgaiI---alheeLqeSp
d1wfxa-  (  85 )    plpgepppiLyhGtteealpli-erGir-g--------rrlkVhLtssle
d2o0qa1  (   2 )           tlIYKILsraeWdaAkaqgrFeGsavDl---adgfIhLSa-ge
d3ki2a1  ( 452 )    egyv---FVGYhGtnhvaAqtivnrIapne-------ekwgGLyVAthAe
d6e3aa-  (  92 )    qk--cPpevLyhGtArrfvksikekGLqpq--------grqYVhLSadve
                            bbbbb                             bbbb  aa

                             160       170       180       190       200 
d1f0la2  (  61 )    dAAgySvdenpl----------sgkAGGVVkVtYp-g-----lTKVLALk
d1s21a-  ( 105 )    yAqh-----------igarpdqadA---YrprtahVsslntpSLnVmAg-
d1wfxa-  ( 127 )    dAvstGrrhg---n-------------lVAvLlVdVeçLrrrglkVerS-
d2o0qa1  (  41 )    qAqetAakwfrgqa-------------nLVLLAVeapLg--edLkweasr
d3ki2a1  ( 500 )    vAHgyArikeGtgeyglptraerdArGVMLRVYIp-raslerFyrtntpL
d6e3aa-  ( 132 )    tAlqvGkrrd---i-------------kPvlLiVnAleAwsegikFylGn
                    aaa                          bbbbb                

                             210       220       230       240       250 
d1f0la2  (  96 )    vdnAetIKkeLglsltepLMeqVGteeFikrfGdgAsRVVLSlpfaegss
d1s21a-  ( 140 )    ------qgAlsavtTeMrLGdFldq----------gGkVysdtg---gds
d1wfxa-  ( 161 )    k------------------------------------tvYtVdwVPpeÇi
d2o0qa1  (  77 )    gg---------------------------------arfPhLyrpLlvseV
d3ki2a1  ( 549 )    enAeehItqvIghs---LpLr----------------neAFTGpesagg-
d6e3aa-  ( 166 )    d------------------------------------kvwLAdaIpskYI
                                                          bbb         

                             260       270       280       290       300 
d1f0la2  ( 146 )    sveyINnweqAkaLsVel-einFetrgkrgqdaMyeymaqaca       
d1s21a-  ( 185 )    VeaLIVtLp--kgrkVpVnild                            
d1wfxa-  ( 175 )    aevrresl                                          
d2o0qa1  (  94 )    treadLdlda-------------------------------dgvPqLgdh
d3ki2a1  ( 579 )    edeTVIGwdMAihAvAipStIpGNAy--eelaIdeeavakEqsistkPpy
d6e3aa-  ( 180 )    rfe                                               
                     bbbb                                             

                      
d1f0la2               
d1s21a-               
d1wfxa-               
d2o0qa1  ( 113 )    la
d3ki2a1  ( 627 )    ke
d6e3aa-
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Diphtheria toxin, N-terminal domainADP-ribosylating toxinsCorynebacterium diphtheriae [TaxId: 1717]view
AvrPphF ORF2, a type III effectorAvrPphF ORF2, a type III effectorPseudomonas syringae pv. phaseolicola [TaxId: 319]view
Probable RNA 2'-phosphotransferase KptATpt1/KptAAeropyrum pernix [TaxId: 56636]view
Hypothetical protein CC0527CC0527-likeCaulobacter crescentus [TaxId: 155892]view
automated matchesautomated matchesVibrio cholerae [TaxId: 666]view
automated matchesautomated matchesClostridium thermocellum [TaxId: 203119]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G A D D V V D S S - - - - - - - K S F V M E N F S S Y H G T K P G Y V D S I Q K G I Q K P S G T Q G N Y D D D W K G F Y S T D N K Y D A A G Y S V D E N P L - - - - - - - - - - S G K A G G V V K V T Y P - G - - - - - L T K V L A L K V D N A E T I K K E L G L S L T E P L M E Q V G T E E F I K R F G D G A S R V V L S L P F A E G S S S V E Y I N N W E Q A K A L S V E L - E I N F E T R G K R G Q D A M Y E Y M A Q A C A - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P S R F V G Q Y T L T S I H Q L S S E E R E N F L D A H D P M R V Y D L N S E T S V Y R T T Q R E Y V R - - - N G Y A T G N P N S G A I I - - - A L H E E L Q E S P Y A Q H - - - - - - - - - - - I G A R P D Q A D A - - - Y R P R T A H V S S L N T P S L N V M A G - - - - - - - Q G A L S A V T T E M R L G D F L D Q - - - - - - - - - - G G K V Y S D T G - - - G D S V E A L I V T L P - - K G R K V P V N I L D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - V R L S K T L A G I L R H H P G R Y G V R L T R E G W A R V S E V V E G L R K A G - W S W V E E W H I V G V A L H D P K G R Y E L R N - - G E I R A R Y G H S I - - P V N V E - - - - - - - - - P L P G E P P P I L Y H G T T E E A L P L I - E R G I R - G - - - - - - - - R R L K V H L T S S L E D A V S T G R R H G - - - N - - - - - - - - - - - - - L V A V L L V D V E C L R R R G L K V E R S - K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T V Y T V D W V P P E C I A E V R R E S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T L I Y K I L S R A E W D A A K A Q G R F E G S A V D L - - - A D G F I H L S A - G E Q A Q E T A A K W F R G Q A - - - - - - - - - - - - - N L V L L A V E A P L G - - E D L K W E A S R G G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A R F P H L Y R P L L V S E V T R E A D L D L D A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G V P Q L G D H L A
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A V I T P - - Q G V T N W T Y Q E L E A T H Q A L T R - - - - - - - E G Y V - - - F V G Y H G T N H V A A Q T I V N R I A P N E - - - - - - - E K W G G L Y V A T H A E V A H G Y A R I K E G T G E Y G L P T R A E R D A R G V M L R V Y I P - R A S L E R F Y R T N T P L E N A E E H I T Q V I G H S - - - L P L R - - - - - - - - - - - - - - - - N E A F T G P E S A G G - E D E T V I G W D M A I H A V A I P S T I P G N A Y - - E E L A I D E E A V A K E Q S I S T K P P Y K E
L I D Y S K L S K E V A Y A L R H A P W E Y G L E L D A E G W V D I N Q L L S S L H E C E K W K K V S E H D L H V M I E K S D K K R Y E I S N - - G K I R A L Y G H S I P Q R I I K E - - - - - - - - - Q K - - C P P E V L Y H G T A R R F V K S I K E K G L Q P Q - - - - - - - - G R Q Y V H L S A D V E T A L Q V G K R R D - - - I - - - - - - - - - - - - - K P V L L I V N A L E A W S E G I K F Y L G N D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K V W L A D A I P S K Y I R F E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1f0la2 A P00588 GO:0005576
d1f0la2 A P00588 GO:0005615
d1f0la2 A P00588 GO:0005886
d1f0la2 A P00588 GO:0008320
d1f0la2 A P00588 GO:0016757
d1f0la2 A P00588 GO:0016779
d1f0la2 A P00588 GO:0035821
d1f0la2 A P00588 GO:0042802
d1f0la2 A P00588 GO:0047286
d1f0la2 A P00588 GO:0071806
d1f0la2 A P00588 GO:0090729
d1f0la2 A P00588 GO:0005576
d1f0la2 A P00588 GO:0005615
d1f0la2 A P00588 GO:0005886
d1f0la2 A P00588 GO:0008320
d1f0la2 A P00588 GO:0016757
d1f0la2 A P00588 GO:0016779
d1f0la2 A P00588 GO:0035821
d1f0la2 A P00588 GO:0042802
d1f0la2 A P00588 GO:0047286
d1f0la2 A P00588 GO:0071806
d1f0la2 A P00588 GO:0090729
d1wfxa_ A Q9YFP5 GO:0003950
d1wfxa_ A Q9YFP5 GO:0016740
d1wfxa_ A Q9YFP5 GO:0003950
d1wfxa_ A Q9YFP5 GO:0016740
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in