BASE   PART 1   PART 2   PART 3   PART 4  
Superfamily : 55961 [ Bet v1-like ]
Class : Alpha and beta proteins (a+b)
Fold : TBP-like
# of Members : 8
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1x53a1  (   8 )                   iptckitlketFltspeelyrvFttqelvqaFth-
d1xfsa-  (   6 )                   idaeldllkreLaVpvnlVwrGLTepelLkkWfvp
d1z94a1  (   2 )                     pntIrLhrvLsApperVyraFldplalakWlPp
d2b79a2  (   1 )                      mkfsfelaVn-kkedAwtyYsqvnqWfvWegd
d2k5ga1  (   1 )    mtspssafpdghgarldaqsirferllPGpiervwawladadkRarWlAG
d2l65a1  (   1 )                   nydpfVrhsvtVkadrktAfktfle--gFpeww--
d3elia1  (   2 )                      adLrLerefavapeaLfawVSdgakLlqWwgp
d3ni8a1  (  19 )                      msfeiteeYyvppevLFnAFTdaytLtrLSr-
                                        bbbbbbb   aaaaaaa   aaaa      

                             60        70        80        90        100 
d1x53a1  (  42 )    ---------ApAtle-adrggkFhMvd---------gnvsGeFtdlvpek
d1xfsa-  (  42 )    kpwsIs----dCrVd-lrpGGeFytvqDp-egn--kfpnsgCFlevtdek
d1z94a1  (  35 )    egfvCk----vlehd-arvggaykeflafasgq--khafggrYlelvpge
d2b79a2  (  33 )    LeIslegefttgqGkmkmd---------------mp-elaFtLv-vrenq
d2k5ga1  (  51 )    gelp-rqpgqtFelhfnhaaltAetAparyaqydrpivarhtllrceppr
d2l65a1  (  32 )    -pnnfrttkvGAplGVDkkggrwyEiDe-----qgeehtfGlIrkvdepd
d3elia1  (  34 )    eglhVp--adqhdLdFtrl-gpWfSVvng-egq--rykVsGqVthVkppq
d3ni8a1  (  50 )    --------gslAeVd-lkvgGkFslfs---------gsilGeFteitkph
                                         bbb              bbbbbbbbb   

                             110       120       130       140       150 
d1x53a1  (  73 )    hivMkWrFk-s--WpeghfAtitltFidk-ngetelcMeGrgiPape---
d1xfsa-  (  85 )    rLiwTsalvkn--yrpavpvtavIeLqpts-sgTrYtAcahnt-pgqr--
d1z94a1  (  79 )    rIrytdrfdd-------agdiTtItLapls-cgAdLsIvqegi-pd----
d2b79a2  (  70 )    cFsDlTatpf-------gnVlfeHeIlenpd-gtISLrHSVsLs------
d2k5ga1  ( 100 )    vlAltwgggag-----eapsevlFelseage-qvrlvltHtrla------
d2l65a1  (  76 )    tlviGwrlngfgridpdnsseftvtfvadgqkkTrvdvehthfdrmgtkh
d3elia1  (  79 )    sVGFtwGwhdd--ddrrgaeShVFiVepc---gArLiLdHrel-gdd---
d3ni8a1  (  82 )    kIvEkWKfr-d--WnecdyStVtVeFisvkenHTkLkLtHnnIpasNkyn
                    bbbbbb b           bbbbbbbbb     bbbbbbb          

                             160       170       180       190     
d1x53a1  ( 116 )    ----eertrqgWqryYFegikqtfgyGa                   
d1xfsa-  ( 142 )    -klheegfhegwgt-tItqLeelLkqekay                 
d1z94a1  ( 120 )    -aippencylgwqq-SLkqLaalVep---d                 
d2b79a2  ( 110 )    tAlafLifa-dvpe-sVgkLkqilet                     
d2k5ga1  ( 138 )    draaMldvAGGWhA-HlavlagklAGqapppFwttlaqaeqdyeqrl
d2l65a1  ( 126 )    akrvrngmdkgwpt-ilqsFqdkIdeegakk                
d3elia1  ( 123 )    ---eslrheegWts-SLrkLaaeLa                      
d3ni8a1  ( 129 )    eggVlerCkngWtqnfLhnIeviLgypkk                  
                           aa  aaa aaaaaaaaa
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1AHSA1 domainHuman (Homo sapiens) [TaxId: 9606]view
Hypothetical protein NE0264AHSA1 domainNitrosomonas europaea [TaxId: 915]view
Hypothetical protein CV1439AHSA1 domainChromobacterium violaceum [TaxId: 536]view
Hypothetical protein SMU440Smu440-likeStreptococcus mutans [TaxId: 1309]view
Uncharacterized protein BPP1335AHSA1 domainBordetella parapertussis [TaxId: 519]view
Calicheamicin gene cluster protein CalCAHSA1 domainMicromonospora echinospora [TaxId: 1877]view
Uncharacterized protein SPO3351AHSA1 domainSilicibacter pomeroyi [TaxId: 89184]view
automated matchesautomated matchesMalaria parasite (Plasmodium falciparum) [TaxId: 5833]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
- - - - - - - - - - - - - - - I P T C K I T L K E T F L T S P E E L Y R V F T T Q E L V Q A F T H - - - - - - - - - - A P A T L E - A D R G G K F H M V D - - - - - - - - - G N V S G E F T D L V P E K H I V M K W R F K - S - - W P E G H F A T I T L T F I D K - N G E T E L C M E G R G I P A P E - - - - - - - E E R T R Q G W Q R Y Y F E G I K Q T F G Y G A - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - I D A E L D L L K R E L A V P V N L V W R G L T E P E L L K K W F V P K P W S I S - - - - D C R V D - L R P G G E F Y T V Q D P - E G N - - K F P N S G C F L E V T D E K R L I W T S A L V K N - - Y R P A V P V T A V I E L Q P T S - S G T R Y T A C A H N T - P G Q R - - - K L H E E G F H E G W G T - T I T Q L E E L L K Q E K A Y - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - P N T I R L H R V L S A P P E R V Y R A F L D P L A L A K W L P P E G F V C K - - - - V L E H D - A R V G G A Y K E F L A F A S G Q - - K H A F G G R Y L E L V P G E R I R Y T D R F D D - - - - - - - A G D I T T I T L A P L S - C G A D L S I V Q E G I - P D - - - - - A I P P E N C Y L G W Q Q - S L K Q L A A L V E P - - - D - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - M K F S F E L A V N - K K E D A W T Y Y S Q V N Q W F V W E G D L E I S L E G E F T T G Q G K M K M D - - - - - - - - - - - - - - - M P - E L A F T L V - V R E N Q C F S D L T A T P F - - - - - - - G N V L F E H E I L E N P D - G T I S L R H S V S L S - - - - - - T A L A F L I F A - D V P E - S V G K L K Q I L E T - - - - - - - - - - - - - - - - - - - - -
M T S P S S A F P D G H G A R L D A Q S I R F E R L L P G P I E R V W A W L A D A D K R A R W L A G G E L P - R Q P G Q T F E L H F N H A A L T A E T A P A R Y A Q Y D R P I V A R H T L L R C E P P R V L A L T W G G G A G - - - - - E A P S E V L F E L S E A G E - Q V R L V L T H T R L A - - - - - - D R A A M L D V A G G W H A - H L A V L A G K L A G Q A P P P F W T T L A Q A E Q D Y E Q R L
- - - - - - - - - - - - - - - N Y D P F V R H S V T V K A D R K T A F K T F L E - - G F P E W W - - - P N N F R T T K V G A P L G V D K K G G R W Y E I D E - - - - - Q G E E H T F G L I R K V D E P D T L V I G W R L N G F G R I D P D N S S E F T V T F V A D G Q K K T R V D V E H T H F D R M G T K H A K R V R N G M D K G W P T - I L Q S F Q D K I D E E G A K K - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - A D L R L E R E F A V A P E A L F A W V S D G A K L L Q W W G P E G L H V P - - A D Q H D L D F T R L - G P W F S V V N G - E G Q - - R Y K V S G Q V T H V K P P Q S V G F T W G W H D D - - D D R R G A E S H V F I V E P C - - - G A R L I L D H R E L - G D D - - - - - - E S L R H E E G W T S - S L R K L A A E L A - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - M S F E I T E E Y Y V P P E V L F N A F T D A Y T L T R L S R - - - - - - - - - G S L A E V D - L K V G G K F S L F S - - - - - - - - - G S I L G E F T E I T K P H K I V E K W K F R - D - - W N E C D Y S T V T V E F I S V K E N H T K L K L T H N N I P A S N K Y N E G G V L E R C K N G W T Q N F L H N I E V I L G Y P K K - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d3elia1 A Q5LN61 GO:0003674
d3elia1 A Q5LN61 GO:0008150
d3elia1 A Q5LN61 GO:0003674
d3elia1 A Q5LN61 GO:0008150
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in