BASE   PART 1   PART 2   PART 3   PART 4  
Superfamily : 55961 [ Bet v1-like ]
Class : Alpha and beta proteins (a+b)
Fold : TBP-like
# of Members : 20
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1t17a-  (   1 )                  mhrhvvtKvlpytp-dqlfelv-gdvdaYpk--fvp
d1xuva1  (  11 )        npTrItaepgkqeiiitReFdAprelVFkAftd--pdlytq--Wig
d2d4ra1  (   2 )                   peVrAeryIpapperVYrlAkd--LegLkp--yL-
d2ffsa1  (   2 )                 qfhlvqVntlpvLdrlqLwGlvcrArPqyFvv-----
d2flha-  (   1 )                 mvkefntqteLsvrleaLWaVLSkdfitVVpk--vlp
d2il5a1  (   5 )             nvenehveVeieklykFspelvyeawtk--kdlLkqwfTsa
d2ktea1  (   1 )          maqnnenAlpditksitleapiqkvwetvSt--segiak--w--
d2le1a1  (   1 )                  matlrrsvevaApAadvwtlvGd--Fsaihr--WH-
d2lf2a1  (   1 )    mrtdlaldfsvnkenktitikrefaavraivweaftr--aeildq--wwa
d2nn5a1  (   2 )         kdtfrlenqtIyFgTeraIsasPqtIWryLTe--tdkLkq--Wfp
d2ns9a1  (  10 )                 lkvryegsfeVsktpeeVFeFltd--pkrfSr--Af-
d2pcsa1  (   2 )                    ngngsieLkgtveeVwskLmd--psilsk--Ci-
d2q3qa2  (   2 )                tlkgalsvkfdVkCpadkFFsaFv----edTn------
d2qpva1  (   2 )                 pvqsriihlsVekpwaeVydfAA-np--gnpr--waa
d2vjga-  (   3 )                  aqshsleitSsvsAekIFsGiVldvdtvIpk--Aat
d3f08a-  (   2 )                   ahttts-eIfgsteqVwqlIGg--FnsLpd--WL-
d3tvqa-  (   1 )                 maarTdnsivVnApfelVwdvTnd--IeaWpe--LF-
d3uida1  (   2 )        pvtdvkhdldtltLtItAeFaapVtrIWqIYad--prqLek--VwG
d5i8fa1  (   1 )             m---aaytivkeeeSpIaPhrLF-AlVlerHqvlvk--aqp
d6v8ma-  (   2 )                 gvhtfeeestSpVpPakLFkatvvdgdelTpk--lip
                                    bbbbbbbb   aaaaaaaa      aa       

                             60        70        80        90        100 
d1t17a-  (  33 )    Witgmrtwngr---vdgavstvdAeaqvgfsf-lrekfatrvrrdk--da
d1xuva1  (  53 )    prgftTalkifepkn---gGswqYiQk-dpegneyafhgvnhdvte--pe
d2d4ra1  (  32 )    keVesLeVva----regarTrSrWvavag---kkvrWlEeEe-Wdd--en
d2ffsa1  (  42 )    -gLerfilvddg------dLhRrlylpg--------lvvedVvLka---p
d2flha-  (  36 )    hiVkdVqlieg---dggvgTiLifnflp-evs-psyqreeItefde--ss
d2il5a1  (  45 )    rtNkeIeA------dvkeggkyrIVdqqrngk-vnviegiyeslvd----
d2ktea1  (  39 )    ---fmpndFqlk-----egqefhl-----qspf-gpspckvlavqa--pt
d2le1a1  (  32 )    pqvsaPtlr--gasphtpgAeRvfgagt-----eeelverlverde--sa
d2lf2a1  (  47 )    pkpwkaktksmdfke---ggtwlyAmv-GpngeehwsiCeyaiikp--ie
d2nn5a1  (  43 )    ----eLeiGe--lgv---nGfWrfil---pd----feetpFtdyae--ek
d2ns9a1  (  42 )    pgfksveve-------dgsftIeLrlslGplrgdarvrAsFedlek---p
d2pcsa1  (  31 )    mgCksLelig------edkykAdlqigiaavkgkydAiievtdikp---p
d2q3qa2  (  30 )    ------------------------------rpfeknGkTeieavdl--vk
d2qpva1  (  36 )    glaggLeadg---------edwiakgg--------plgevrvnfaphnef
d2vjga-  (  37 )    gayksvevk-g---dggagTvriitlpe-gsp-ittmtvrTdavnk--ea
d3f08a-  (  32 )    pyIpsSklt--egg-----rvRhLaNpd-----getIierlevfnd--ke
d3tvqa-  (  33 )    seyaeAeilr----qdgdGfdFrLktrpdangrvwewvshRv-pdk--gs
d3uida1  (  44 )    ppshpAtVvdHdLrp---ggrVtYfmt-gpdgekyAGyWeItaVde--ph
d5i8fa1  (  37 )    hvfksGeiieg---dggvgTvTkItfvd-ghp-ltymlh-Fdeida--an
d6v8ma-  (  37 )    -aiqsieiveg---nggpgTvkkvtave-g---tsyvlhkIdaide--at
                         bbbb           bbbbbb         bbbbbbbbbb     

                             110       120       130       140       150 
d1t17a-  (  77 )    rsidvsllyG-pf--------krlnngWrFmpe-gd-atrvefviefAfk
d1xuva1  (  97 )    riistfefegl--p----ekghvildtarFeal-pgdrTkLtshsvfqt-
d2d4ra1  (  73 )    lrNrFfSpe-g----dfd----ryegtwvFlp-eg-eGTrVvLtltyelt
d2ffsa1  (  77 )    dsahysipsa------------vaGgsltIeepe-pgsLfVrfayctryp
d2flha-  (  79 )    heIGlqVieg-gyls---qgLsyYkttfkLsei-eedkTlVnVkIsydhv
d2il5a1  (  85 )    eyVkTigps-----------etqdvIeVeFfer-et-ggTqlFyyrSlVe
d2ktea1  (  73 )    elSFewdt--e-----------gwvvtFqledlg--ektgFtliHsGwke
d2le1a1  (  73 )    rrlvYtMpd-p--pfpit----nHrAvlevvp-rddrhCtvvWtAmFdCs
d2lf2a1  (  91 )    rFtGkdgftda--sgklntemprSnwdMrFidk-g-eitevqyhisydd-
d2nn5a1  (  76 )    yLGVtwd---------------tgiIyFdLkeq-aphqTlLvFsEsLpe-
d2ns9a1  (  82 )    skATVkgsgrg--agstl----dftlrfaVep-sg-ggSrVswvfegnvg
d2pcsa1  (  72 )    yhYkllvngeg--gpgfv----naegvidLtp-indecTqLtytysaevg
d2q3qa2  (  48 )    Kttiqsgs--e--iq---kyFktlkGsIaVtpigvgdgShVvwtfhFekv
d2qpva1  (  69 )    GvIdhvvtlp-dg--------lkvynaLrVtpn-gs-gTeVsftLlrleg
d2vjga-  (  79 )    lsydstvidg-dill---gfIesiethmvVvpt-adgGSiTkttaifhTk
d3f08a-  (  68 )    ryYtYsi-n-A--pfpVt----nYlStIqVkeGtesnTSlVeWsGtFtpv
d3tvqa-  (  76 )    rtVrahrvetg----pFa----ymnlhWtYra-va-ggTeMrWvqeFdMk
d3uida1  (  88 )    sFsFldgfAde--dfnpntdlpvstnvytFteh-dg-gTrAtyvgtyas-
d5i8fa1  (  80 )    fyCkytLfeG-dvlr---dnIekVvyevkleav---gggSgkitvtyhPk
d6v8ma-  (  79 )    ytydytisgg-tgfq----iLekVsFktkLeaa-d--gGSikvsvtFhTk
                     bbbbbb                bbbbbbbbb      bbbbbbbbb   

                             160       170       180       190       200 
d1t17a-  ( 116 )    s---------allDamlaanvd-raAgklia-cFearAqqlhg--a    
d1xuva1  ( 139 )    --------i--edRdg-lqsg-eegindSYe-rLdelLek-kk       
d2d4ra1  ( 112 )    ip---ifgg--llrklvqk-lq-enVeslLk-GLeerVlaass       
d2ffsa1  ( 124 )    ----------lpydafvkqayaDvtIatIrd-rfGa              
d2flha-  ( 131 )    ----------------tptkTS-qstlmyLr-rLeryls           
d2il5a1  ( 127 )    kerrftnleYkqkkkeyhda-v-hgfelfdkyhvietstqq         
d2ktea1  ( 108 )    pnevigkan--ekSsvvrgkmd-ggwtgivn-erlrkavee         
d2le1a1  ( 115 )    --------p--etArelesviGdgvFavGln-alaerygr          
d2lf2a1  ( 136 )    --------v--aqleatiqmgfkegitmame-nldellvsgkk       
d2nn5a1  ( 109 )    ------nFt--tprhkdIA-gWsivLnrLkq-VVetpdaapekidfpqie
d2ns9a1  ( 124 )    g----lAas--mggrvldslar-rmindvis-GVkreLgea         
d2pcsa1  ( 115 )    g----kvaa--igqrmlggvak-llisdffk-kIqkeIaks         
d2q3qa2  (  93 )    hkdid-------dPhsiidesv-kyFkklDe-ailnf             
d2qpva1  ( 109 )    -------------tdedfeqdA-saitadLe--Lksllea          
d2vjga-  ( 124 )    g--------davVpeenikfad-aqntalFk-aIeaylian         
d3f08a-  ( 111 )    --------a--vsdeeAinlVh-giYsdGLk-aLqhafld          
d3tvqa-  ( 116 )    p-----gap--fdnahmtahln-tttraNMe-rIkkiIedrhregq    
d3uida1  ( 133 )    --------a--eaLqqVldmgviegassaIn-qIdallt---a       
d5i8fa1  ( 124 )    p--------gctvneeevkige-kkayeFyk-qVeeyLaanpevfa    
d6v8ma-  ( 123 )    g--------dapLpdevhqdvk-qksqgifk-aIegyvlsn         
                                  aaaaaaaa aaaaaaaa aaaaaa            

                             210 
d1t17a-                         
d1xuva1                         
d2d4ra1                         
d2ffsa1                         
d2flha-                         
d2il5a1                         
d2ktea1                         
d2le1a1                         
d2lf2a1                         
d2nn5a1  ( 149 )    nhYlekltnlen
d2ns9a1                         
d2pcsa1                         
d2q3qa2                         
d2qpva1                         
d2vjga-                         
d3f08a-                         
d3tvqa-                         
d3uida1                         
d5i8fa1                         
d6v8ma-
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Hypothetical protein CC1736oligoketide cyclase/dehydrase-likeCaulobacter crescentus [TaxId: 155892]view
Hypothetical protein MM0500AHSA1 domainMethanosarcina mazei [TaxId: 2209]view
Hypothetical protein TTHA0849oligoketide cyclase/dehydrase-likeThermus thermophilus [TaxId: 274]view
Hypothetical protein PA1206PA1206-likePseudomonas aeruginosa [TaxId: 287]view
automated matchesautomated matchesMung bean (Vigna radiata) [TaxId: 157791]view
Hypothetical protein SA2116AHSA1 domainStaphylococcus aureus [TaxId: 1280]view
automated matchesAHSA1 domainBacillus subtilis [TaxId: 1423]view
automated matchesautomated matchesThermobifida fusca [TaxId: 269800]view
automated matchesautomated matchesCytophaga hutchinsonii [TaxId: 269798]view
Hypothetical protein EF2215AHSA1 domainEnterococcus faecalis [TaxId: 1351]view
Hypothetical protein APE2225CoxG-likeAeropyrum pernix [TaxId: 56636]view
Hypothetical protein GKP20CoxG-likeGeobacillus kaustophilus [TaxId: 1462]view
Hypothetical protein At1G24000Pathogenesis-related protein 10 (PR10)-likeThale cress (Arabidopsis thaliana) [TaxId: 3702]view
Uncharacterized protein Atu1531Atu1531-likeAgrobacterium tumefaciens [TaxId: 358]view
automated matchesautomated matchesCarrot (Daucus carota) [TaxId: 4039]view
automated matchesAtu1531-likeBacillus thuringiensis [TaxId: 180856]view
Multifunctional enzyme TcmN, cyclase/aromatase domainoligoketide cyclase/dehydrase-likeStreptomyces glaucescens [TaxId: 1907]view
automated matchesautomated matchesMycobacterium smegmatis [TaxId: 246196]view
automated matchesautomated matchesHypericum perforatum [TaxId: 65561]view
automated matchesPathogenesis-related protein 10 (PR10)-likePeanut (Arachis hypogaea) [TaxId: 3818]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
- - - - - - - - - - - - - - M H R H V V T K V L P Y T P - D Q L F E L V - G D V D A Y P K - - F V P W I T G M R T W N G R - - - V D G A V S T V D A E A Q V G F S F - L R E K F A T R V R R D K - - D A R S I D V S L L Y G - P F - - - - - - - - K R L N N G W R F M P E - G D - A T R V E F V I E F A F K S - - - - - - - - - A L L D A M L A A N V D - R A A G K L I A - C F E A R A Q Q L H G - - A - - - - - - - - - - - - - - - -
- - - - N P T R I T A E P G K Q E I I I T R E F D A P R E L V F K A F T D - - P D L Y T Q - - W I G P R G F T T A L K I F E P K N - - - G G S W Q Y I Q K - D P E G N E Y A F H G V N H D V T E - - P E R I I S T F E F E G L - - P - - - - E K G H V I L D T A R F E A L - P G D R T K L T S H S V F Q T - - - - - - - - - I - - E D R D G - L Q S G - E E G I N D S Y E - R L D E L L E K - K K - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - P E V R A E R Y I P A P P E R V Y R L A K D - - L E G L K P - - Y L - K E V E S L E V V A - - - - R E G A R T R S R W V A V A G - - - K K V R W L E E E E - W D D - - E N L R N R F F S P E - G - - - - D F D - - - - R Y E G T W V F L P - E G - E G T R V V L T L T Y E L T I P - - - I F G G - - L L R K L V Q K - L Q - E N V E S L L K - G L E E R V L A A S S - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - Q F H L V Q V N T L P V L D R L Q L W G L V C R A R P Q Y F V V - - - - - - G L E R F I L V D D G - - - - - - D L H R R L Y L P G - - - - - - - - L V V E D V V L K A - - - P D S A H Y S I P S A - - - - - - - - - - - - V A G G S L T I E E P E - P G S L F V R F A Y C T R Y P - - - - - - - - - - L P Y D A F V K Q A Y A D V T I A T I R D - R F G A - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - M V K E F N T Q T E L S V R L E A L W A V L S K D F I T V V P K - - V L P H I V K D V Q L I E G - - - D G G V G T I L I F N F L P - E V S - P S Y Q R E E I T E F D E - - S S H E I G L Q V I E G - G Y L S - - - Q G L S Y Y K T T F K L S E I - E E D K T L V N V K I S Y D H V - - - - - - - - - - - - - - - - T P T K T S - Q S T L M Y L R - R L E R Y L S - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - N V E N E H V E V E I E K L Y K F S P E L V Y E A W T K - - K D L L K Q W F T S A R T N K E I E A - - - - - - D V K E G G K Y R I V D Q Q R N G K - V N V I E G I Y E S L V D - - - - E Y V K T I G P S - - - - - - - - - - - E T Q D V I E V E F F E R - E T - G G T Q L F Y Y R S L V E K E R R F T N L E Y K Q K K K E Y H D A - V - H G F E L F D K Y H V I E T S T Q Q - - - - - - - - - - - - - - - - - - - - -
- - - - - - M A Q N N E N A L P D I T K S I T L E A P I Q K V W E T V S T - - S E G I A K - - W - - - - - F M P N D F Q L K - - - - - E G Q E F H L - - - - - Q S P F - G P S P C K V L A V Q A - - P T E L S F E W D T - - E - - - - - - - - - - - G W V V T F Q L E D L G - - E K T G F T L I H S G W K E P N E V I G K A N - - E K S S V V R G K M D - G G W T G I V N - E R L R K A V E E - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - M A T L R R S V E V A A P A A D V W T L V G D - - F S A I H R - - W H - P Q V S A P T L R - - G A S P H T P G A E R V F G A G T - - - - - E E E L V E R L V E R D E - - S A R R L V Y T M P D - P - - P F P I T - - - - N H R A V L E V V P - R D D R H C T V V W T A M F D C S - - - - - - - - P - - E T A R E L E S V I G D G V F A V G L N - A L A E R Y G R - - - - - - - - - - - - - - - - - - - - - -
M R T D L A L D F S V N K E N K T I T I K R E F A A V R A I V W E A F T R - - A E I L D Q - - W W A P K P W K A K T K S M D F K E - - - G G T W L Y A M V - G P N G E E H W S I C E Y A I I K P - - I E R F T G K D G F T D A - - S G K L N T E M P R S N W D M R F I D K - G - E I T E V Q Y H I S Y D D - - - - - - - - - V - - A Q L E A T I Q M G F K E G I T M A M E - N L D E L L V S G K K - - - - - - - - - - - - - - - - - - -
- - - - - K D T F R L E N Q T I Y F G T E R A I S A S P Q T I W R Y L T E - - T D K L K Q - - W F P - - - - E L E I G E - - L G V - - - N G F W R F I L - - - P D - - - - F E E T P F T D Y A E - - E K Y L G V T W D - - - - - - - - - - - - - - - T G I I Y F D L K E Q - A P H Q T L L V F S E S L P E - - - - - - - N F T - - T P R H K D I A - G W S I V L N R L K Q - V V E T P D A A P E K I D F P Q I E N H Y L E K L T N L E N
- - - - - - - - - - - - - L K V R Y E G S F E V S K T P E E V F E F L T D - - P K R F S R - - A F - P G F K S V E V E - - - - - - - D G S F T I E L R L S L G P L R G D A R V R A S F E D L E K - - - P S K A T V K G S G R G - - A G S T L - - - - D F T L R F A V E P - S G - G G S R V S W V F E G N V G G - - - - L A A S - - M G G R V L D S L A R - R M I N D V I S - G V K R E L G E A - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - N G N G S I E L K G T V E E V W S K L M D - - P S I L S K - - C I - M G C K S L E L I G - - - - - - E D K Y K A D L Q I G I A A V K G K Y D A I I E V T D I K P - - - P Y H Y K L L V N G E G - - G P G F V - - - - N A E G V I D L T P - I N D E C T Q L T Y T Y S A E V G G - - - - K V A A - - I G Q R M L G G V A K - L L I S D F F K - K I Q K E I A K S - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - T L K G A L S V K F D V K C P A D K F F S A F V - - - - E D T N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R P F E K N G K T E I E A V D L - - V K K T T I Q S G S - - E - - I Q - - - K Y F K T L K G S I A V T P I G V G D G S H V V W T F H F E K V H K D I D - - - - - - - D P H S I I D E S V - K Y F K K L D E - A I L N F - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - P V Q S R I I H L S V E K P W A E V Y D F A A - N P - - G N P R - - W A A G L A G G L E A D G - - - - - - - - - E D W I A K G G - - - - - - - - P L G E V R V N F A P H N E F G V I D H V V T L P - D G - - - - - - - - L K V Y N A L R V T P N - G S - G T E V S F T L L R L E G - - - - - - - - - - - - - T D E D F E Q D A - S A I T A D L E - - L K S L L E A - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - A Q S H S L E I T S S V S A E K I F S G I V L D V D T V I P K - - A A T G A Y K S V E V K - G - - - D G G A G T V R I I T L P E - G S P - I T T M T V R T D A V N K - - E A L S Y D S T V I D G - D I L L - - - G F I E S I E T H M V V V P T - A D G G S I T K T T A I F H T K G - - - - - - - - D A V V P E E N I K F A D - A Q N T A L F K - A I E A Y L I A N - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - A H T T T S - E I F G S T E Q V W Q L I G G - - F N S L P D - - W L - P Y I P S S K L T - - E G G - - - - - R V R H L A N P D - - - - - G E T I I E R L E V F N D - - K E R Y Y T Y S I - N - A - - P F P V T - - - - N Y L S T I Q V K E G T E S N T S L V E W S G T F T P V - - - - - - - - A - - V S D E E A I N L V H - G I Y S D G L K - A L Q H A F L D - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - M A A R T D N S I V V N A P F E L V W D V T N D - - I E A W P E - - L F - S E Y A E A E I L R - - - - Q D G D G F D F R L K T R P D A N G R V W E W V S H R V - P D K - - G S R T V R A H R V E T G - - - - P F A - - - - Y M N L H W T Y R A - V A - G G T E M R W V Q E F D M K P - - - - - G A P - - F D N A H M T A H L N - T T T R A N M E - R I K K I I E D R H R E G Q - - - - - - - - - - - - - - - -
- - - - P V T D V K H D L D T L T L T I T A E F A A P V T R I W Q I Y A D - - P R Q L E K - - V W G P P S H P A T V V D H D L R P - - - G G R V T Y F M T - G P D G E K Y A G Y W E I T A V D E - - P H S F S F L D G F A D E - - D F N P N T D L P V S T N V Y T F T E H - D G - G T R A T Y V G T Y A S - - - - - - - - - A - - E A L Q Q V L D M G V I E G A S S A I N - Q I D A L L T - - - A - - - - - - - - - - - - - - - - - - -
- - - - - - - - - M - - - A A Y T I V K E E E S P I A P H R L F - A L V L E R H Q V L V K - - A Q P H V F K S G E I I E G - - - D G G V G T V T K I T F V D - G H P - L T Y M L H - F D E I D A - - A N F Y C K Y T L F E G - D V L R - - - D N I E K V V Y E V K L E A V - - - G G G S G K I T V T Y H P K P - - - - - - - - G C T V N E E E V K I G E - K K A Y E F Y K - Q V E E Y L A A N P E V F A - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - G V H T F E E E S T S P V P P A K L F K A T V V D G D E L T P K - - L I P - A I Q S I E I V E G - - - N G G P G T V K K V T A V E - G - - - T S Y V L H K I D A I D E - - A T Y T Y D Y T I S G G - T G F Q - - - - I L E K V S F K T K L E A A - D - - G G S I K V S V T F H T K G - - - - - - - - D A P L P D E V H Q D V K - Q K S Q G I F K - A I E G Y V L S N - - - - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1t17a_ A Q9A7I7 GO:0045333
d1t17a_ A Q9A7I7 GO:0048039
d1t17a_ A Q9A7I7 GO:0045333
d1t17a_ A Q9A7I7 GO:0048039
d2nn5a1 A Q832L1 GO:0046872
d2nn5a1 A Q832L1 GO:0046872
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in