Superfamily : 55945 [ TATA-box binding protein-like ]
Class : Alpha and beta proteins (a+b)
Fold : TBP-like
# of Members : 6
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1aisa1  (   1 )    mvdmskvklrienivasvdlfaq----LdLekVldlÇp-n-Skynpeefp
d1mpga2  (   1 )            my----tlnWqppydWsw--mLgflaaravssvetV-ad--s
d1pcza2  (  93 )     kfkrapqidvqnmvfsgdIgre----FnldvValtLp-n-Ceyepeqfp
d2xhia1  (  10 )    rmghrtlastpal-WasIp--CprseLrLdlVLpsgqS-frWreqsp--a
d3eika1  (  20 )         giiptlqnvvatVnLsck----LdLknIalrAr-n-Aeynpkrfa
d3eika2  ( 114 )             kiqnivsscdikfs----IrLegLayahs-nyCsyepelfp
                                  bbbbb          aaaa         b       

                             60        70        80        90        100 
d1aisa1  (  45 )    GIiÇhld----dPkVaLlIfssGkLvVtgAk------------svqdier
d1mpga2  (  34 )    yYarslavgeyrgvVtAiPdiahtLhInLs-----------agLepvaae
d1pcza2  ( 136 )    GViYrVk----epkSvIlLfssGkIvCsgAk------------seadAwe
d2xhia1  (  54 )    hwsgvLa----dqvWTLTqte-eqLhCTVyrgdksqasrPt-------pd
d3eika1  (  59 )    AViMrir----epkTtAlIfasGkMvItgAk------------seksSrm
d3eika2  ( 150 )    GLiyrmv----kpkIvLlIfvsGkIvLtgAk------------vrddiyq
                     bbbbb        bbbbb    bbbbbbb                 aaa

                             110       120       130       140  
d1aisa1  (  79 )    AvakLaqkLksigv                              
d1mpga2  (  74 )    ClakMsrlFdLqcnpqivngalglg                   
d1pcza2  ( 170 )    AvrkLlreLdkygll                             
d2xhia1  (  92 )    eleaVrkyFqLdvtLaqlyhhwgsvdshfqevaqkfqGvRlLrq
d3eika1  (  93 )    AAqrYakiIhklgfn-----------------------Atfddf
d3eika2  ( 184 )    AfnnIypvLiqhrk                              
                    aaaaaaaaa                                   

 

 

Domain IDNameFamilySourceDomainSTRING-DB
TATA-box binding protein (TBP), C-terminal domainTATA-box binding protein (TBP), C-terminal domainPyrococcus woesei [TaxId: 2262]view
3-Methyladenine DNA glycosylase II (gene alkA or aidA)DNA repair glycosylase, N-terminal domainEscherichia coli [TaxId: 562]view
TATA-box binding protein (TBP), C-terminal domainTATA-box binding protein (TBP), C-terminal domainPyrococcus woesei [TaxId: 2262]view
automated matchesautomated matchesHuman (Homo sapiens) [TaxId: 9606]view
automated matchesautomated matchesFungus (Encephalitozoon cuniculi) [TaxId: 6035]view
automated matchesautomated matchesFungus (Encephalitozoon cuniculi) [TaxId: 6035]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140
M V D M S K V K L R I E N I V A S V D L F A Q - - - - L D L E K V L D L C P - N - S K Y N P E E F P G I I C H L D - - - - D P K V A L L I F S S G K L V V T G A K - - - - - - - - - - - - S V Q D I E R A V A K L A Q K L K S I G V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - M Y - - - - T L N W Q P P Y D W S W - - M L G F L A A R A V S S V E T V - A D - - S Y Y A R S L A V G E Y R G V V T A I P D I A H T L H I N L S - - - - - - - - - - - A G L E P V A A E C L A K M S R L F D L Q C N P Q I V N G A L G L G - - - - - - - - - - - - - - - - - - -
- K F K R A P Q I D V Q N M V F S G D I G R E - - - - F N L D V V A L T L P - N - C E Y E P E Q F P G V I Y R V K - - - - E P K S V I L L F S S G K I V C S G A K - - - - - - - - - - - - S E A D A W E A V R K L L R E L D K Y G L L - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
R M G H R T L A S T P A L - W A S I P - - C P R S E L R L D L V L P S G Q S - F R W R E Q S P - - A H W S G V L A - - - - D Q V W T L T Q T E - E Q L H C T V Y R G D K S Q A S R P T - - - - - - - P D E L E A V R K Y F Q L D V T L A Q L Y H H W G S V D S H F Q E V A Q K F Q G V R L L R Q
- - - - - G I I P T L Q N V V A T V N L S C K - - - - L D L K N I A L R A R - N - A E Y N P K R F A A V I M R I R - - - - E P K T T A L I F A S G K M V I T G A K - - - - - - - - - - - - S E K S S R M A A Q R Y A K I I H K L G F N - - - - - - - - - - - - - - - - - - - - - - - A T F D D F
- - - - - - - - - K I Q N I V S S C D I K F S - - - - I R L E G L A Y A H S - N Y C S Y E P E L F P G L I Y R M V - - - - K P K I V L L I F V S G K I V L T G A K - - - - - - - - - - - - V R D D I Y Q A F N N I Y P V L I Q H R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1aisa1 A P62001 GO:0003677
d1aisa1 A P62001 GO:0003700
d1aisa1 A P62001 GO:0006352
d1aisa1 A P62001 GO:0006355
d1aisa1 A P62001 GO:0140223
d1aisa1 A P61999 GO:0003677
d1aisa1 A P61999 GO:0003700
d1aisa1 A P61999 GO:0006352
d1aisa1 A P61999 GO:0006355
d1aisa1 A P61999 GO:0140223
d1aisa1 A P62001 GO:0003677
d1aisa1 A P62001 GO:0003700
d1aisa1 A P62001 GO:0006352
d1aisa1 A P62001 GO:0006355
d1aisa1 A P62001 GO:0140223
d1aisa1 A P61999 GO:0003677
d1aisa1 A P61999 GO:0003700
d1aisa1 A P61999 GO:0006352
d1aisa1 A P61999 GO:0006355
d1aisa1 A P61999 GO:0140223
d1aisa1 A P62001 GO:0003677
d1aisa1 A P62001 GO:0003700
d1aisa1 A P62001 GO:0006352
d1aisa1 A P62001 GO:0006355
d1aisa1 A P62001 GO:0140223
d1aisa1 A P61999 GO:0003677
d1aisa1 A P61999 GO:0003700
d1aisa1 A P61999 GO:0006352
d1aisa1 A P61999 GO:0006355
d1aisa1 A P61999 GO:0140223
d1mpga2 A P04395 GO:0003824
d1mpga2 A P04395 GO:0003905
d1mpga2 A P04395 GO:0005515
d1mpga2 A P04395 GO:0005737
d1mpga2 A P04395 GO:0006281
d1mpga2 A P04395 GO:0006284
d1mpga2 A P04395 GO:0006285
d1mpga2 A P04395 GO:0006307
d1mpga2 A P04395 GO:0006950
d1mpga2 A P04395 GO:0006974
d1mpga2 A P04395 GO:0008725
d1mpga2 A P04395 GO:0016787
d1mpga2 A P04395 GO:0032131
d1mpga2 A P04395 GO:0032993
d1mpga2 A P04395 GO:0043916
d1mpga2 A P04395 GO:0052821
d1mpga2 A P04395 GO:0052822
d1mpga2 A P04395 GO:0003824
d1mpga2 A P04395 GO:0003905
d1mpga2 A P04395 GO:0005515
d1mpga2 A P04395 GO:0005737
d1mpga2 A P04395 GO:0006281
d1mpga2 A P04395 GO:0006284
d1mpga2 A P04395 GO:0006285
d1mpga2 A P04395 GO:0006307
d1mpga2 A P04395 GO:0006950
d1mpga2 A P04395 GO:0006974
d1mpga2 A P04395 GO:0008725
d1mpga2 A P04395 GO:0016787
d1mpga2 A P04395 GO:0032131
d1mpga2 A P04395 GO:0032993
d1mpga2 A P04395 GO:0043916
d1mpga2 A P04395 GO:0052821
d1mpga2 A P04395 GO:0052822
d1pcza2 A P62001 GO:0003677
d1pcza2 A P62001 GO:0003700
d1pcza2 A P62001 GO:0006352
d1pcza2 A P62001 GO:0006355
d1pcza2 A P62001 GO:0140223