Superfamily : 55166 [ Hedgehog/DD-peptidase ]
Class : Alpha and beta proteins (a+b)
Fold : Hedgehog/DD-peptidase
# of Members : 5
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1lbua2  (  84 )                    vnFtyaeLNrÇns-----------------d--W
d1r44a-  (   1 )                             meigFTfLdeiVhgVrwdAkYA--t
d1tzpa-  (  20 )                                     atpWqkitqpvpgsaqS
d1xp2b1  (   2 )                             m---alteawLiekAn--rkLn--a
d3k7ib-  (  41 )    prklvpLaykqfspnvpektlgASgryegkIarsserfkeLtpNynp--d
                                                                      

                             60        70        80        90        100 
d1lbua2  (  99 )    sgGkvs------------aa----tAra---nA---lvTmwkLqaMrham
d1r44a-  (  24 )    wdNFTg------------kp----VdGYevnrIVGTyeLAesLlkAkelA
d1tzpa-  (  37 )    IGsFsnGÇIvgAdtLpiqsehYqVMrtdqr-ryFGHpdLVmFIqrLSsqV
d1xp2b1  (  20 )    g--------------------------------gMykiTSdkTrnVIkkM
d3k7ib-  (  89 )    IiFkde------------en----tgaDrlMtq---rCkdrLnsLAisVm
                                                        aaaaaaaaaaaaa 

                             110       120       130       140       150 
d1lbua2  ( 127 )    g---dkpItVngGFrsvtçNsnv---------------------------
d1r44a-  (  58 )    atq-gYgLlLwDGYrPkrAVncFmqwA-aqpennltkesYYpnIdRteMi
d1tzpa-  (  86 )    sn-lgmgtVLIgdMGMPAGGrFng--------------------------
d1xp2b1  (  38 )    ake-giyLcVaqGyrstaeQnalyaqgrtkpgaivt------nakGg---
d3k7ib-  ( 120 )    nqwpgvkLrVtkGWDedghhs-----------------------------
                            bbbb                                      

                             160       170       180       190       200 
d1lbua2  ( 147 )    ---ggasnsrHMyGhAAdLgag----------------------------
d1r44a-  ( 106 )    skgYvaskSsHSrGSAIDLTLyrldtgelVpMgsrFdfMderShHaangI
d1tzpa-  ( 109 )    ------ghaSHQTGLDVdIfLqLpk--trwtsaqllrpqaldLVsrdgkh
d1xp2b1  (  78 )    -------qsnHNyGVAVdLCLytndGkdviwestt---------------
d3k7ib-  ( 141 )    ------eesLHYEGRAVdITTsd---------------------------
                             3333  bbbbb                              

                             210       220       230       240       250 
d1lbua2  ( 166 )    ------sQgfçaLAqaArnhgFteIlGpgypghn----------------
d1r44a-  ( 156 )    s--cneaqnRrrLrsIMenSgFeA-----ys-------------------
d1tzpa-  ( 151 )    VvstlwkpeIfsLIklAAqdkdVtrIfVnpAIKqqLÇldAgtdrdWLrkV
d1xp2b1  ( 106 )    -------srWkkVvaAMkaegFkW-----GGdwk----------------
d3k7ib-  ( 158 )    ----rdrnkYglLArlAveAgFdwVyyesk--------------------
                             aaaaaaaaa     b                          

                             260       270       280       290       300 
d1lbua2  ( 194 )    -------dhThVAggd----grfwsApsÇgi                   
d1r44a-  ( 180 )    ------leWWhYvLrdepypnsyfdfpVk                     
d1tzpa-  ( 201 )    rPwfqhrahMHVrLrÇPadSleÇedqplPpsgdgçgaeLqswfeplppsÇ
d1xp2b1  ( 128 )    ----sfkdypHFeLcdAvsg---ekipaa                     
d3k7ib-  ( 184 )    -------ahVhCSV---------ksehsaa                    
                              bbb                                     

                             
d1lbua2                      
d1r44a-                      
d1tzpa-  ( 266 )    qalldehvi
d1xp2b1                      
d3k7ib-                      
                             

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Zn2+ DD-carboxypeptidase C-terminal catalytic domainMuramoyl-pentapeptide carboxypeptidaseStreptomyces albus G [TaxId: 1962]view
D-Ala-D-Ala dipeptidase VanXVanX-likeEnterococcus faecium [TaxId: 1352]view
D-alanyl-D-alanine-endopeptidase MepAMepA-likeEscherichia coli [TaxId: 562]view
L-alanyl-D-glutamate peptidase PlyVanY-likeListeria phage A500 [TaxId: 40522]view
automated matchesHedgehog (development protein), N-terminal signaling domainHuman (Homo sapiens) [TaxId: 9606]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300
- - - - - - - - - - - - - - - - V N F T Y A E L N R C N S - - - - - - - - - - - - - - - - - D - - W S G G K V S - - - - - - - - - - - - A A - - - - T A R A - - - N A - - - L V T M W K L Q A M R H A M G - - - D K P I T V N G G F R S V T C N S N V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G A S N S R H M Y G H A A D L G A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Q G F C A L A Q A A R N H G F T E I L G P G Y P G H N - - - - - - - - - - - - - - - - - - - - - - - D H T H V A G G D - - - - G R F W S A P S C G I - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - M E I G F T F L D E I V H G V R W D A K Y A - - T W D N F T G - - - - - - - - - - - - K P - - - - V D G Y E V N R I V G T Y E L A E S L L K A K E L A A T Q - G Y G L L L W D G Y R P K R A V N C F M Q W A - A Q P E N N L T K E S Y Y P N I D R T E M I S K G Y V A S K S S H S R G S A I D L T L Y R L D T G E L V P M G S R F D F M D E R S H H A A N G I S - - C N E A Q N R R R L R S I M E N S G F E A - - - - - Y S - - - - - - - - - - - - - - - - - - - - - - - - - L E W W H Y V L R D E P Y P N S Y F D F P V K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A T P W Q K I T Q P V P G S A Q S I G S F S N G C I V G A D T L P I Q S E H Y Q V M R T D Q R - R Y F G H P D L V M F I Q R L S S Q V S N - L G M G T V L I G D M G M P A G G R F N G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G H A S H Q T G L D V D I F L Q L P K - - T R W T S A Q L L R P Q A L D L V S R D G K H V V S T L W K P E I F S L I K L A A Q D K D V T R I F V N P A I K Q Q L C L D A G T D R D W L R K V R P W F Q H R A H M H V R L R C P A D S L E C E D Q P L P P S G D G C G A E L Q S W F E P L P P S C Q A L L D E H V I
- - - - - - - - - - - - - - - - - - - - - - - - - M - - - A L T E A W L I E K A N - - R K L N - - A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G M Y K I T S D K T R N V I K K M A K E - G I Y L C V A Q G Y R S T A E Q N A L Y A Q G R T K P G A I V T - - - - - - N A K G G - - - - - - - - - - Q S N H N Y G V A V D L C L Y T N D G K D V I W E S T T - - - - - - - - - - - - - - - - - - - - - - S R W K K V V A A M K A E G F K W - - - - - G G D W K - - - - - - - - - - - - - - - - - - - - S F K D Y P H F E L C D A V S G - - - E K I P A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
P R K L V P L A Y K Q F S P N V P E K T L G A S G R Y E G K I A R S S E R F K E L T P N Y N P - - D I I F K D E - - - - - - - - - - - - E N - - - - T G A D R L M T Q - - - R C K D R L N S L A I S V M N Q W P G V K L R V T K G W D E D G H H S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E E S L H Y E G R A V D I T T S D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R D R N K Y G L L A R L A V E A G F D W V Y Y E S K - - - - - - - - - - - - - - - - - - - - - - - - - - - A H V H C S V - - - - - - - - - K S E H S A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1lbua2 A P00733 GO:0004180
d1lbua2 A P00733 GO:0005576
d1lbua2 A P00733 GO:0006508
d1lbua2 A P00733 GO:0008237
d1lbua2 A P00733 GO:0009046
d1lbua2 A P00733 GO:0046872
d1lbua2 A P00733 GO:0071555
d1lbua2 A P00733 GO:0004180
d1lbua2 A P00733 GO:0005576
d1lbua2 A P00733 GO:0006508
d1lbua2 A P00733 GO:0008237
d1lbua2 A P00733 GO:0009046
d1lbua2 A P00733 GO:0046872
d1lbua2 A P00733 GO:0071555
d1r44a_ A Q06241 GO:0006508
d1r44a_ A Q06241 GO:0008237
d1r44a_ A Q06241 GO:0008270
d1r44a_ A Q06241 GO:0016805
d1r44a_ A Q06241 GO:0046677
d1r44a_ A Q06241 GO:0046872
d1r44a_ A Q06241 GO:0071555
d1tzpa_ A P0C0T5 GO:0000270
d1tzpa_ A P0C0T5 GO:0004175
d1tzpa_ A P0C0T5 GO:0004222
d1tzpa_ A P0C0T5 GO:0004252
d1tzpa_ A P0C0T5 GO:0006508
d1tzpa_ A P0C0T5 GO:0008233
d1tzpa_ A P0C0T5 GO:0008237
d1tzpa_ A P0C0T5 GO:0009252
d1tzpa_ A P0C0T5 GO:0009410
d1tzpa_ A P0C0T5 GO:0030288
d1tzpa_ A P0C0T5 GO:0042597
d1tzpa_ A P0C0T5 GO:0046872