Superfamily : 54719 [ Fe,Mn superoxide dismutase (SOD), C-terminal domain ]
Class : Alpha and beta proteins (a+b)
Fold : Fe,Mn superoxide dismutase (SOD), C-terminal domain
# of Members : 8
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1coja2  (  91 )      ggkgepse--aLkkkIeeDiggldactneLkaaAmafr--GwAiLGLd
d1ix9a2  (  91 )        gttlqg--dLkaAIerdfgsvdnFkaeFekaAasrfgsGwAwLVLk
d2cw3a2  (  91 )    tsgsgrhvpp--rLlklIrarwgnvdeMkenFmrkAtalfgsGwIwLvwd
d3ak2a2  (  93 )        ggtPgg--rVadlIekqfggfekFkalFSaaAktVegvGwGVLAFd
d3ceia2  (  85 )         talsd--eLkgaLekDfgslekFkedFiksAttLfgsGwNwAAYn
d3qvna2  (  90 )    vs-ggghPdtssaLGkqIvaqygsvsnLidiTnskLagiqgsGwAFIVkn
d4h3ea2  ( 120 )       ngkamps---FesaVtaqfgsveqFkdaFvqaGvnnfgsGwTwLCVd
d6s0da2  (  86 )         gePsk--eLmdtIkrdFgsldnLqkrLSdiTiavqgsGwGwLGy-
                             a  aaaaaaaaaa  aaaaaaaaaaaaa     bbbbbbb 

                             60        70        80        90        100 
d1coja2  ( 135 )    ifs-GrLvvnGLdah------nvynltgLipLIvIdTyehaYyvdyknkr
d1ix9a2  ( 135 )    g---dkLaVvsTanqdsPlmgeaiSgAsgfpImGLdVwehaYflkfqnrr
d2cw3a2  ( 139 )    tre-rrLdLvgtkdahsplsed-----agipLftCdVwehaYyldyqhdr
d3ak2a2  ( 137 )    Plt-eeLrIlqVekh------nvlmtaglvpIlvIdVwehaYylqykndr
d3ceia2  ( 128 )    ldt-qkIeiiqtsnaqtPvtd------kkVpLlvVdVwehaYyidhknar
d3qvna2  ( 141 )    kqnggaLdVvttanqdtIs-ap-----hlvpIIaIdAwehaYylqyqnvk
d4h3ea2  ( 165 )    psn-knLvidntsnagcPltk------glrpVlaVdVwehaYykdfenrr
d6s0da2  ( 129 )    kkd-kiLkiatcanqdpL---e-----gmvpLfGIdVwehaYylqyknvr
                          bbbbbbb                bbbbbbb  333 aaaa   a

                             110       120       130       140 
d1coja2  ( 178 )    ppyIdaffkninwdvVnerFekAmkayealkdfik        
d1ix9a2  ( 182 )    pdyIkefwnvVnWdeAaarFaakk                   
d2cw3a2  ( 184 )    aayLtrwwslInWefAdsnL                       
d3ak2a2  ( 180 )    gsyVenwWnvVnwddVekrLeqAlnnAkplyl           
d3ceia2  ( 171 )    pvyLekfyghInwhfVsqcyewAkkeglgsvdyyinelvhkkl
d3qvna2  ( 185 )    ldyFkaiWnvinWaeAesrys                      
d4h3ea2  ( 209 )    pdyLkeiwsvidWefVakmhaqai                   
d6s0da2  ( 170 )    pdyVhaiwkiAnWknIserFanArq                  
                    aaaaaaa     aaaaaaaaaaa                    

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Fe superoxide dismutase (FeSOD)Fe,Mn superoxide dismutase (SOD), C-terminal domainAquifex pyrophilus [TaxId: 2714]view
Mn superoxide dismutase (MnSOD)Fe,Mn superoxide dismutase (SOD), C-terminal domainEscherichia coli [TaxId: 562]view
automated matchesautomated matchesPerkinsus marinus [TaxId: 31276]view
automated matchesautomated matchesAeropyrum pernix [TaxId: 272557]view
automated matchesautomated matchesHelicobacter pylori [TaxId: 210]view
automated matchesautomated matchesYeast (Candida albicans) [TaxId: 5476]view
automated matchesautomated matchesTrypanosoma cruzi [TaxId: 353153]view
automated matchesautomated matchesNematode (Caenorhabditis elegans) [TaxId: 6239]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140
- - G G K G E P S E - - A L K K K I E E D I G G L D A C T N E L K A A A M A F R - - G W A I L G L D I F S - G R L V V N G L D A H - - - - - - N V Y N L T G L I P L I V I D T Y E H A Y Y V D Y K N K R P P Y I D A F F K N I N W D V V N E R F E K A M K A Y E A L K D F I K - - - - - - - -
- - - - G T T L Q G - - D L K A A I E R D F G S V D N F K A E F E K A A A S R F G S G W A W L V L K G - - - D K L A V V S T A N Q D S P L M G E A I S G A S G F P I M G L D V W E H A Y F L K F Q N R R P D Y I K E F W N V V N W D E A A A R F A A K K - - - - - - - - - - - - - - - - - - -
T S G S G R H V P P - - R L L K L I R A R W G N V D E M K E N F M R K A T A L F G S G W I W L V W D T R E - R R L D L V G T K D A H S P L S E D - - - - - A G I P L F T C D V W E H A Y Y L D Y Q H D R A A Y L T R W W S L I N W E F A D S N L - - - - - - - - - - - - - - - - - - - - - - -
- - - - G G T P G G - - R V A D L I E K Q F G G F E K F K A L F S A A A K T V E G V G W G V L A F D P L T - E E L R I L Q V E K H - - - - - - N V L M T A G L V P I L V I D V W E H A Y Y L Q Y K N D R G S Y V E N W W N V V N W D D V E K R L E Q A L N N A K P L Y L - - - - - - - - - - -
- - - - - T A L S D - - E L K G A L E K D F G S L E K F K E D F I K S A T T L F G S G W N W A A Y N L D T - Q K I E I I Q T S N A Q T P V T D - - - - - - K K V P L L V V D V W E H A Y Y I D H K N A R P V Y L E K F Y G H I N W H F V S Q C Y E W A K K E G L G S V D Y Y I N E L V H K K L
V S - G G G H P D T S S A L G K Q I V A Q Y G S V S N L I D I T N S K L A G I Q G S G W A F I V K N K Q N G G A L D V V T T A N Q D T I S - A P - - - - - H L V P I I A I D A W E H A Y Y L Q Y Q N V K L D Y F K A I W N V I N W A E A E S R Y S - - - - - - - - - - - - - - - - - - - - - -
- - - N G K A M P S - - - F E S A V T A Q F G S V E Q F K D A F V Q A G V N N F G S G W T W L C V D P S N - K N L V I D N T S N A G C P L T K - - - - - - G L R P V L A V D V W E H A Y Y K D F E N R R P D Y L K E I W S V I D W E F V A K M H A Q A I - - - - - - - - - - - - - - - - - - -
- - - - - G E P S K - - E L M D T I K R D F G S L D N L Q K R L S D I T I A V Q G S G W G W L G Y - K K D - K I L K I A T C A N Q D P L - - - E - - - - - G M V P L F G I D V W E H A Y Y L Q Y K N V R P D Y V H A I W K I A N W K N I S E R F A N A R Q - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1coja2 A Q9X6W9 GO:0004784
d1coja2 A Q9X6W9 GO:0006801
d1coja2 A Q9X6W9 GO:0016491
d1coja2 A Q9X6W9 GO:0019430
d1coja2 A Q9X6W9 GO:0046872
d1coja2 A Q9X6W9 GO:0004784
d1coja2 A Q9X6W9 GO:0006801
d1coja2 A Q9X6W9 GO:0016491
d1coja2 A Q9X6W9 GO:0019430
d1coja2 A Q9X6W9 GO:0046872
d1ix9a2 A P00448 GO:0003677
d1ix9a2 A P00448 GO:0004784
d1ix9a2 A P00448 GO:0005737
d1ix9a2 A P00448 GO:0005829
d1ix9a2 A P00448 GO:0006801
d1ix9a2 A P00448 GO:0006979
d1ix9a2 A P00448 GO:0009408
d1ix9a2 A P00448 GO:0010447
d1ix9a2 A P00448 GO:0016209
d1ix9a2 A P00448 GO:0016491
d1ix9a2 A P00448 GO:0019430
d1ix9a2 A P00448 GO:0030145
d1ix9a2 A P00448 GO:0042803
d1ix9a2 A P00448 GO:0046872
d1ix9a2 A P00448 GO:0071291
d1ix9a2 A P00448 GO:0003677
d1ix9a2 A P00448 GO:0004784
d1ix9a2 A P00448 GO:0005737
d1ix9a2 A P00448 GO:0005829
d1ix9a2 A P00448 GO:0006801
d1ix9a2 A P00448 GO:0006979
d1ix9a2 A P00448 GO:0009408
d1ix9a2 A P00448 GO:0010447
d1ix9a2 A P00448 GO:0016209
d1ix9a2 A P00448 GO:0016491
d1ix9a2 A P00448 GO:0019430
d1ix9a2 A P00448 GO:0030145
d1ix9a2 A P00448 GO:0042803
d1ix9a2 A P00448 GO:0046872
d1ix9a2 A P00448 GO:0071291