Superfamily : 54713 [ Elongation factor Ts (EF-Ts), dimerisation domain ]
Class : Alpha and beta proteins (a+b)
Fold : EF-Ts domain-like
# of Members : 5
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1tfea-  (  55 )       areGiighyihhn-----------qrvgVlVeLnCetdfvArnelFq
d1xb2b2  ( 112 )    grkTkeGligllqeg-------------dTtVlVeVnCetdfvsrnlkFq
d1xb2b3  ( 223 )         gfyvGsyvhgamhspslhnlvlGkygAlViCets----elkanLa
d4pc3c2  (  55 )      vAadGviktkidg-------------nygiilevnCqtdfvakdagFq
d4pc3c3  ( 140 )          dvlgsyqhg------------arigvlvaAk-gAd--------e
                          bbbbbbbb               bbbbbbbb            a

                             60        70        80        90        100 
d1tfea-  (  91 )    nlAkdLAmHIAmmnPryvsaeeIpaeelekerqiYIqaAlne--gkpqqi
d1xb2b2  ( 149 )    qlvqqValGTllhCqnlkdql-----------------styskgfln---
d1xb2b3  ( 264 )    dLGrrLGqHVvgmaPlsvgsldde--------------------------
d4pc3c2  (  90 )    afAdkvldaAvag-----------------------------kit-d---
d4pc3c3  ( 163 )    elvkhiAmHvAaskPefikpedvsaevvekeyqvqldiAmqs--gkpkei
                    aaaaaaaaaaaaa                                     

                             110       120       130       140       150 
d1tfea-  ( 139 )    AekiAegrlkkyleeVVLleQpfvkddkvkVkeliqqaiakigenIvVrr
d1xb2b2  ( 179 )    --------------sseLseLpAgperegsLkdqlalaigklgenMiLkr
d1xb2b3  ( 288 )    ---------pggeaetkMlSQpYlldpsitLGqyVqph------gVsVvd
d4pc3c2  ( 107 )    --------------vevlkaq--------Feeervalvaki-geninirr
d4pc3c3  ( 211 )    AekmvegrmkkftgevSltgqpFvmepsktvgqllkeh------nAevtg
                                  a               aaaaaaa         bbbb

                             160       170    
d1tfea-  ( 189 )    fcrfelga                  
d1xb2b2  ( 215 )    AaWvkvpa                  
d1xb2b3  ( 323 )    fvrfecgeg                 
d4pc3c2  ( 134 )    vaAle--g                  
d4pc3c3  ( 255 )    firfevgegiekvetdfaaevaamsk
                    bbbbb
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Elongation factor Ts (EF-Ts), dimerisation domain, C-terminal domainElongation factor Ts (EF-Ts), dimerisation domainThermus thermophilus [TaxId: 274]view
Elongation factor Ts (EF-Ts), dimerisation domain, N-terminal domainElongation factor Ts (EF-Ts), dimerisation domainCow (Bos taurus), mitochondrial [TaxId: 9913]view
Elongation factor Ts (EF-Ts), dimerisation domain, N-terminal domainElongation factor Ts (EF-Ts), dimerisation domainCow (Bos taurus), mitochondrial [TaxId: 9913]view
Elongation factor Ts (EF-Ts), dimerisation domain, N-terminal domainElongation factor Ts (EF-Ts), dimerisation domainEscherichia coli [TaxId: 562]view
Elongation factor Ts (EF-Ts), dimerisation domain, C-terminal domainElongation factor Ts (EF-Ts), dimerisation domainEscherichia coli [TaxId: 562]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170
- - - A R E G I I G H Y I H H N - - - - - - - - - - - Q R V G V L V E L N C E T D F V A R N E L F Q N L A K D L A M H I A M M N P R Y V S A E E I P A E E L E K E R Q I Y I Q A A L N E - - G K P Q Q I A E K I A E G R L K K Y L E E V V L L E Q P F V K D D K V K V K E L I Q Q A I A K I G E N I V V R R F C R F E L G A - - - - - - - - - - - - - - - - - -
G R K T K E G L I G L L Q E G - - - - - - - - - - - - - D T T V L V E V N C E T D F V S R N L K F Q Q L V Q Q V A L G T L L H C Q N L K D Q L - - - - - - - - - - - - - - - - - S T Y S K G F L N - - - - - - - - - - - - - - - - - S S E L S E L P A G P E R E G S L K D Q L A L A I G K L G E N M I L K R A A W V K V P A - - - - - - - - - - - - - - - - - -
- - - - - G F Y V G S Y V H G A M H S P S L H N L V L G K Y G A L V I C E T S - - - - E L K A N L A D L G R R L G Q H V V G M A P L S V G S L D D E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P G G E A E T K M L S Q P Y L L D P S I T L G Q Y V Q P H - - - - - - G V S V V D F V R F E C G E G - - - - - - - - - - - - - - - - -
- - V A A D G V I K T K I D G - - - - - - - - - - - - - N Y G I I L E V N C Q T D F V A K D A G F Q A F A D K V L D A A V A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K I T - D - - - - - - - - - - - - - - - - - V E V L K A Q - - - - - - - - F E E E R V A L V A K I - G E N I N I R R V A A L E - - G - - - - - - - - - - - - - - - - - -
- - - - - - D V L G S Y Q H G - - - - - - - - - - - - A R I G V L V A A K - G A D - - - - - - - - E E L V K H I A M H V A A S K P E F I K P E D V S A E V V E K E Y Q V Q L D I A M Q S - - G K P K E I A E K M V E G R M K K F T G E V S L T G Q P F V M E P S K T V G Q L L K E H - - - - - - N A E V T G F I R F E V G E G I E K V E T D F A A E V A A M S K

 

 

 

 

 

Member Chain UniProtKB GO term
d1tfea_ A P43895 GO:0003746
d1tfea_ A P43895 GO:0006414
d1xb2b2 B P49410 GO:0003746
d1xb2b2 B P49410 GO:0006414
d1xb2b2 B P43896 GO:0003746
d1xb2b2 B P43896 GO:0006414
d1xb2b2 B P49410 GO:0003746
d1xb2b2 B P49410 GO:0006414
d1xb2b2 B P43896 GO:0003746
d1xb2b2 B P43896 GO:0006414
d1xb2b2 B P49410 GO:0003746
d1xb2b2 B P49410 GO:0006414
d1xb2b2 B P43896 GO:0003746
d1xb2b2 B P43896 GO:0006414
d1xb2b3 B P49410 GO:0003746
d1xb2b3 B P49410 GO:0006414
d1xb2b3 B P43896 GO:0003746
d1xb2b3 B P43896 GO:0006414
d1xb2b3 B P49410 GO:0003746
d1xb2b3 B P49410 GO:0006414
d1xb2b3 B P43896 GO:0003746
d1xb2b3 B P43896 GO:0006414
d1xb2b3 B P49410 GO:0003746
d1xb2b3 B P49410 GO:0006414
d1xb2b3 B P43896 GO:0003746
d1xb2b3 B P43896 GO:0006414
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in