PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1d7la2  ( 174 )    lkvfervypfGwLGLlAdtppVsh---------eliyanhpr-gfALCsq
d1n4wa2  ( 319 )          gpnGnimtARanhmwnptgahqssipalgidawdnsdsSvfAei
d2voua2  ( 164 )        ptyagyVtWrGvLqpgeVaddVwnyF-ndkftyglld-dghLiAyp
d3c96a2  ( 183 )         shggitmWrgvTefd------rFld-gktmivandehwSrLvAyP
                          bbbbbbbbbbb                  bbb       bbbbb

                             60        70        80        90        100 
d1d7la2  ( 214 )    rsa------trSrYyVqVpl---------------------sekvedWs-
d1n4wa2  ( 363 )    apmpagletwvslYlAitknp----qrGtfvydaatdraklnwtrdqn-a
d2voua2  ( 208 )    ipGrenaesprLnFqWywnvaegpdLdeLM-tDvrgirlptsVhnnsLnp
d3c96a2  ( 221 )    isahaaegkSlVnWvCmVpsa---avgq---------eadwnrd---Gr-
                    b         bbbbbbbb                          333   

                             110       120       130       140    
d1d7la2  ( 236 )    --derFwteLkarLpse---vaekLv-tgpsleksiaplrsfvvep
d1n4wa2  ( 408 )    pAvnaAkalFdrinkangtiYrydlfgtqlkAfaddfcyhplg   
d2voua2  ( 257 )    hNlrqFhskGeslf-----kpfrdLV-l-nAssPfVtvvada    
d3c96a2  ( 259 )    --ledVlpfFadwdlgw--FdIrdLL-t-rnqlIlqypmvd     
                      aaaaaaaa           a          bbbbbbbb

Domains
Outliers

Domain ID	Name	Family	Source	STRING-DB
d1d7la2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1d7la2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	p-Hydroxybenzoate hydroxylase (PHBH)	PHBH-like	Pseudomonas aeruginosa [TaxId: 287]	view
d1n4wa2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1n4wa2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Cholesterol oxidase	GMC oxidoreductases	Streptomyces sp. [TaxId: 1931]	view
d2voua2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2voua2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Dihydroxypyridine hydroxylase DhpH	PHBH-like	Arthrobacter nicotinovorans [TaxId: 29320]	view
d3c96a2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d3c96a2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Monooxygenase PhzS	PHBH-like	Pseudomonas aeruginosa [TaxId: 287]	view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term
d1d7la2	A	P20586	GO:0004497
d1d7la2	A	P20586	GO:0009056
d1d7la2	A	P20586	GO:0016491
d1d7la2	A	P20586	GO:0016709
d1d7la2	A	P20586	GO:0018659
d1d7la2	A	P20586	GO:0043639
d1d7la2	A	P20586	GO:0043640
d1d7la2	A	P20586	GO:0050660
d1d7la2	A	P20586	GO:0071949
d1d7la2	A	P20586	GO:0106356
d1d7la2	A	P20586	GO:0004497
d1d7la2	A	P20586	GO:0009056
d1d7la2	A	P20586	GO:0016491
d1d7la2	A	P20586	GO:0016709
d1d7la2	A	P20586	GO:0018659
d1d7la2	A	P20586	GO:0043639
d1d7la2	A	P20586	GO:0043640
d1d7la2	A	P20586	GO:0050660
d1d7la2	A	P20586	GO:0071949
d1d7la2	A	P20586	GO:0106356
d1n4wa2	A	P12676	GO:0004769
d1n4wa2	A	P12676	GO:0005576
d1n4wa2	A	P12676	GO:0006707
d1n4wa2	A	P12676	GO:0008203
d1n4wa2	A	P12676	GO:0016491
d1n4wa2	A	P12676	GO:0016614
d1n4wa2	A	P12676	GO:0016853
d1n4wa2	A	P12676	GO:0016995
d1n4wa2	A	P12676	GO:0050660
d1n4wa2	A	P12676	GO:0004769
d1n4wa2	A	P12676	GO:0005576
d1n4wa2	A	P12676	GO:0006707
d1n4wa2	A	P12676	GO:0008203
d1n4wa2	A	P12676	GO:0016491
d1n4wa2	A	P12676	GO:0016614
d1n4wa2	A	P12676	GO:0016853
d1n4wa2	A	P12676	GO:0016995
d1n4wa2	A	P12676	GO:0050660
d2voua2	A	Q93NG3	GO:0000166
d2voua2	A	Q93NG3	GO:0016491
d2voua2	A	Q93NG3	GO:0018663
d2voua2	A	Q93NG3	GO:0019608
d2voua2	A	Q93NG3	GO:0042803
d2voua2	A	Q93NG3	GO:0050660
d2voua2	A	Q93NG3	GO:0071949
d2voua2	A	Q93NG3	GO:0000166
d2voua2	A	Q93NG3	GO:0016491
d2voua2	A	Q93NG3	GO:0018663
d2voua2	A	Q93NG3	GO:0019608
d2voua2	A	Q93NG3	GO:0042803
d2voua2	A	Q93NG3	GO:0050660
d2voua2	A	Q93NG3	GO:0071949
d3c96a2	A	Q9HWG9	GO:0004497
d3c96a2	A	Q9HWG9	GO:0005515
d3c96a2	A	Q9HWG9	GO:0071949
d3c96a2	A	Q9HWG9	GO:0102169
d3c96a2	A	Q9HWG9	GO:0004497
d3c96a2	A	Q9HWG9	GO:0005515
d3c96a2	A	Q9HWG9	GO:0071949
d3c96a2	A	Q9HWG9	GO:0102169

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