PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1a12a-  (  21 )    kkvkvshrsHstepglVLTLGq-GdvGQLGlgenvmerkkPalVsIpedV
d3qhyb-  (  41 )                 atsVvAwggnndwgEatVpaeAqs-----------gV
                                   bbbbb                              

                             60        70        80        90        100 
d1a12a-  (  70 )    VqAeAGgmHTVCLSksGqVYSFGcNdeGALGrdtsvegsemvpgkVelqe
d3qhyb-  (  67 )    daIAGGyfHGLAlk-ggkVlGwganlngQltmp----aaTqs--------
                     bbbb   bbbbbb    bbbbb               333         

                             110       120       130       140       150 
d1a12a-  ( 120 )    kVvQVsAgdsHTAALTddGrVfLWGSFrdnngvIGLlepmkksmvPvqvq
d3qhyb-  ( 104 )    gVdaIaAgnyHSLAlk-dgeViAwGgn--edgQttvpaeAr---s-----
                       bbbb   bbbbbb    bbbbb                         

                             160       170       180       190       200 
d1a12a-  ( 170 )    ldvpVvkVaSGndHLVMLTadgdLyTLGcGeqGQLGRVpeLFanrggrqg
d3qhyb-  ( 143 )    ---gVdaIaAGAwASYAlk-dgkViAwGddsdgQTtvpaeAqs-------
                        bbbbbb   bbbbbb    bbbbb          333         

                             210       220       230       240       250 
d1a12a-  ( 220 )    lerLLvpkcVmlksrgsrghvrFqdAfCGayFTFAISheghVYGFGlSny
d3qhyb-  ( 182 )    ---------------------gVtaLdGGvyTALAVk-nggViAwGdnyf
                                          bbbbbb   bbbbbb    bbbbb    

                             260       270       280       290       300 
d1a12a-  ( 270 )    hQLGtpgtescfiPqnLtsFknstksWvgFsGGqhHTVCmDseGkAYSLG
d3qhyb-  ( 210 )    gQTt-----------vpaeAqs---gVddVaGGifHSLAlk-dgkViAwG
                                     333      bbbbbb   bbbbbb    bbbbb

                             310       320       330       340       350 
d1a12a-  ( 320 )    raeyGRLGlgegaeeksiPtlIsrLpaVssVaCGaSVGYAVTkdgrVfAW
d3qhyb-  ( 245 )    DnrykQttvp-----------teAlsgVsaIaSGewYSLALk-ngkViAw
                                                 bbbb    bbbbb    bbbb

                             360       370       380       390       400 
d1a12a-  ( 370 )    GmGtnyQLGtgqdedawsPveMmgkqLenrvVlsVsSggqHTVLLVkdke
d3qhyb-  ( 283 )    Gs---------------srtAp--ssVqs-gVssIeAGpnAAYALkg   
                                                   bbbbbb    bbbbb    

                      
d1a12a-  ( 420 )    qs
d3qhyb-

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d1a12a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1a12a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Regulator of chromosome condensation RCC1	Regulator of chromosome condensation RCC1	Human (Homo sapiens) [TaxId: 9606]		view
d3qhyb- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d3qhyb- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	beta-lactamase inhibitor protein-II, BLIP-II	Streptomyces exfoliatus [TaxId: 1905]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term
d1a12a_	A	P18754	GO:0000082
d1a12a_	A	P18754	GO:0000785
d1a12a_	A	P18754	GO:0000794
d1a12a_	A	P18754	GO:0003677
d1a12a_	A	P18754	GO:0003682
d1a12a_	A	P18754	GO:0005085
d1a12a_	A	P18754	GO:0005515
d1a12a_	A	P18754	GO:0005634
d1a12a_	A	P18754	GO:0005654
d1a12a_	A	P18754	GO:0005694
d1a12a_	A	P18754	GO:0005737
d1a12a_	A	P18754	GO:0007052
d1a12a_	A	P18754	GO:0007059
d1a12a_	A	P18754	GO:0007084
d1a12a_	A	P18754	GO:0007088
d1a12a_	A	P18754	GO:0016032
d1a12a_	A	P18754	GO:0031267
d1a12a_	A	P18754	GO:0031491
d1a12a_	A	P18754	GO:0031492
d1a12a_	A	P18754	GO:0032991
d1a12a_	A	P18754	GO:0042393
d1a12a_	A	P18754	GO:0043199
d1a12a_	A	P18754	GO:0046982
d1a12a_	A	P18754	GO:0051225
d1a12a_	A	P18754	GO:0051301

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-	-	-	-	-	-	-	-	-	-	-	-	-	A	T	S	V	V	A	W	G	G	N	N	D	W	G	E	A	T	V	P	A	E	A	Q	S	-	-	-	-	-	-	-	-	-	-	-	G	V	D	A	I	A	G	G	Y	F	H	G	L	A	L	K	-	G	G	K	V	L	G	W	G	A	N	L	N	G	Q	L	T	M	P	-	-	-	-	A	A	T	Q	S	-	-	-	-	-	-	-	-	G	V	D	A	I	A	A	G	N	Y	H	S	L	A	L	K	-	D	G	E	V	I	A	W	G	G	N	-	-	E	D	G	Q	T	T	V	P	A	E	A	R	-	-	-	S	-	-	-	-	-	-	-	-	G	V	D	A	I	A	A	G	A	W	A	S	Y	A	L	K	-	D	G	K	V	I	A	W	G	D	D	S	D	G	Q	T	T	V	P	A	E	A	Q	S	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	V	T	A	L	D	G	G	V	Y	T	A	L	A	V	K	-	N	G	G	V	I	A	W	G	D	N	Y	F	G	Q	T	T	-	-	-	-	-	-	-	-	-	-	-	V	P	A	E	A	Q	S	-	-	-	G	V	D	D	V	A	G	G	I	F	H	S	L	A	L	K	-	D	G	K	V	I	A	W	G	D	N	R	Y	K	Q	T	T	V	P	-	-	-	-	-	-	-	-	-	-	-	T	E	A	L	S	G	V	S	A	I	A	S	G	E	W	Y	S	L	A	L	K	-	N	G	K	V	I	A	W	G	S	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	R	T	A	P	-	-	S	S	V	Q	S	-	G	V	S	S	I	E	A	G	P	N	A	A	Y	A	L	K	G	-	-	-	-	-

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