Superfamily : 49344 [ CBD9-like ]
Class : All beta proteins
Fold : Immunoglobulin-like beta-sandwich
# of Members : 5
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1i8ua-  (   1 )    vAtAkygtPvIdGeideiWntTeeieT---kavamgsl-------dnAtA
d1pl3a-  (   2 )                        sAsqftDpttgfqFtGitdp------vhdV
d1ug9a3  ( 776 )    riGalsDpa---------------gdd---nGpgtYryPtnsaYvpgAFD
d4qi3a1  (   2 )                      nnvPntftdpdsgItFNtWgldedspqTqggF
d6jt6a-  (  21 )                        sPtqwyDsiTgVtFsrfyqq------dTdA
                                           bbb      bbb              b

                             60        70        80        90        100 
d1i8ua-  (  42 )    kVrVLWde--------nyLYVLAiVkDp----vlnkdnsnpweqDSVEIF
d1pl3a-  (  26 )    tYGFVFpplatsgaqsteFIGEVvApi--aSkWIgIaLgGahnnDLlLVA
d1ug9a3  ( 808 )    LtgVdVydag------ddyaFvatIaG-----eVtnpwggqaISHQRVNI
d4qi3a1  (  34 )    tFGVALpsdAltt-daseFIGyLkÇArndesGWÇgIsLgGpmtnSLlITA
d6jt6a-  (  45 )    SWGYIFPs-asggqapdeFIGLFqGpa--sAGWIGNSLGGsmrnNPlLVG
                    bbbbb             bbbbbbbb                    bbbb

                             110       120       130       140       150 
d1i8ua-  (  80 )    IDEnn--hktg-------yYe-ddDAQFrVNym--neqtfgt-gGs-par
d1pl3a-  (  74 )    Wang-----------------nqIvsstRwAtgyvqptaYtg-------t
d1ug9a3  ( 847 )    YLGkGeggatpGlpgTnInLehaWdsVIVTDGrfdgAGVyapdgtrt---
d4qi3a1  (  83 )    WPhe-----------------dtVytslRFAtgyampdvYeg-------d
d6jt6a-  (  92 )    WVdg-----------------stprIsARwAtdyappsiys--------g
                    bbb                     bbbbbb       bb           

                             160       170       180       190       200 
d1i8ua-  ( 116 )    FkTaVkli----egGYIVEAAIkWktiP-------tp---ntvIGFNIQV
d1pl3a-  ( 100 )    AtLttlpettinsthWkWVFrÇqgÇTeWn-ng--gGidVt-sqgvLawaF
d1ug9a3  ( 894 )    saVsLlav---pear-qIvTrVpkaaLg-------gldPatArMSVAMFG
d4qi3a1  ( 109 )    AeIt-QVsssVnsthFsLIFrÇknÇLqWshggssggasTsggvLvLgWvQ
d6jt6a-  ( 117 )    PrltiLgSSGtngniQRIVYrÇqnÇtrWtgga--gGIptt-gsavFgwaF
                     bbbb         bbbbbbbbb                   bbbbbbbb

                             210       220       230       240       250 
d1i8ua-  ( 153 )    NdA-----nekGq-rvGiISw--sDptnnSwrdPskFgnLLi        
d1pl3a-  ( 146 )    Sn-vaVddpsdpq-StFs--------------eht-dfgfFgId-YstAh
d1ug9a3  ( 933 )    NAe-----sgeGignVRPVYdgayWeagdpawIkewrFGGGagvfdgt--
d4qi3a1  ( 158 )    Af-ddPgnptcpeqItlq--------------qhdngmgiwgAqLntdAA
d6jt6a-  ( 164 )    hsttkPltpsdps-Sgly--------------rhs-haaqygfd-IgnAr
                    b                                    bbbb         

                             260       270       280       290   
d1i8ua-                                                          
d1pl3a-  ( 178 )    sanYqnyln                                    
d1ug9a3  ( 976 )    ipsrDtdtdDPNALDVLvgegqtqaavLdwragspVvVpMlgLqp
d4qi3a1  ( 193 )    spsYtdwAaqAtktvt                             
d6jt6a-  ( 197 )    ttlYdyylqqLtnapplsg
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Xylanase 10AFamily 9 carbohydrate-binding module, CBD9Thermotoga maritima [TaxId: 2336]view
Cytochrome domain of cellobiose dehydrogenaseCytochrome domain of cellobiose dehydrogenaseBasidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]view
Glucodextranase, domain CGlucodextranase, domain CArthrobacter globiformis [TaxId: 1665]view
automated matchesautomated matchesMyriococcum thermophilum [TaxId: 455373]view
automated matchesautomated matchesInky cap fungus (Coprinopsis cinerea) [TaxId: 5346]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
V A T A K Y G T P V I D G E I D E I W N T T E E I E T - - - K A V A M G S L - - - - - - - D N A T A K V R V L W D E - - - - - - - - N Y L Y V L A I V K D P - - - - V L N K D N S N P W E Q D S V E I F I D E N N - - H K T G - - - - - - - Y Y E - D D D A Q F R V N Y M - - N E Q T F G T - G G S - P A R F K T A V K L I - - - - E G G Y I V E A A I K W K T I P - - - - - - - T P - - - N T V I G F N I Q V N D A - - - - - N E K G Q - R V G I I S W - - S D P T N N S W R D P S K F G N L L I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - S A S Q F T D P T T G F Q F T G I T D P - - - - - - V H D V T Y G F V F P P L A T S G A Q S T E F I G E V V A P I - - A S K W I G I A L G G A H N N D L L L V A W A N G - - - - - - - - - - - - - - - - - N Q I V S S T R W A T G Y V Q P T A Y T G - - - - - - - T A T L T T L P E T T I N S T H W K W V F R C Q G C T E W N - N G - - G G I D V T - S Q G V L A W A F S N - V A V D D P S D P Q - S T F S - - - - - - - - - - - - - - E H T - D F G F F G I D - Y S T A H S A N Y Q N Y L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
R I G A L S D P A - - - - - - - - - - - - - - - G D D - - - N G P G T Y R Y P T N S A Y V P G A F D L T G V D V Y D A G - - - - - - D D Y A F V A T I A G - - - - - E V T N P W G G Q A I S H Q R V N I Y L G K G E G G A T P G L P G T N I N L E H A W D S V I V T D G R F D G A G V Y A P D G T R T - - - S A V S L L A V - - - P E A R - Q I V T R V P K A A L G - - - - - - - G L D P A T A R M S V A M F G N A E - - - - - S G E G I G N V R P V Y D G A Y W E A G D P A W I K E W R F G G G A G V F D G T - - I P S R D T D T D D P N A L D V L V G E G Q T Q A A V L D W R A G S P V V V P M L G L Q P
- - - - - - - - - - - - - - - - - - N N V P N T F T D P D S G I T F N T W G L D E D S P Q T Q G G F T F G V A L P S D A L T T - D A S E F I G Y L K C A R N D E S G W C G I S L G G P M T N S L L I T A W P H E - - - - - - - - - - - - - - - - - D T V Y T S L R F A T G Y A M P D V Y E G - - - - - - - D A E I T - Q V S S S V N S T H F S L I F R C K N C L Q W S H G G S S G G A S T S G G V L V L G W V Q A F - D D P G N P T C P E Q I T L Q - - - - - - - - - - - - - - Q H D N G M G I W G A Q L N T D A A S P S Y T D W A A Q A T K T V T - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - S P T Q W Y D S I T G V T F S R F Y Q Q - - - - - - D T D A S W G Y I F P S - A S G G Q A P D E F I G L F Q G P A - - S A G W I G N S L G G S M R N N P L L V G W V D G - - - - - - - - - - - - - - - - - S T P R I S A R W A T D Y A P P S I Y S - - - - - - - - G P R L T I L G S S G T N G N I Q R I V Y R C Q N C T R W T G G A - - G G I P T T - G S A V F G W A F H S T T K P L T P S D P S - S G L Y - - - - - - - - - - - - - - R H S - H A A Q Y G F D - I G N A R T T L Y D Y Y L Q Q L T N A P P L S G - - - - - - - - - - - - - - - - - - - - - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1i8ua_ A Q60037 GO:0004553
d1i8ua_ A Q60037 GO:0016052
d1i8ua_ A Q60037 GO:0030246
d1ug9a3 A Q9LBQ9 GO:0003824
d1ug9a3 A Q9LBQ9 GO:0004339
d1ug9a3 A Q9LBQ9 GO:0004553
d1ug9a3 A Q9LBQ9 GO:0005975
d1ug9a3 A Q9LBQ9 GO:0030246
d1ug9a3 A Q9LBQ9 GO:0046872
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in