Superfamily : 48173 [ Cryptochrome/photolyase FAD-binding domain ]
Class : All alpha proteins
Fold : Cryptochrome/photolyase FAD-binding domain
# of Members : 5
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1iqra1  ( 172 )                lplpepgeeaAlagLraFLe--akLpry-aeerdrLdg
d1np7a1  ( 205 )            dhrsVlaFqggetaGlarLqdYFwhgdrLkdY-ketrngMvg
d1owla1  ( 205 )                  pvepgetaAiarLqeFCd--raIady-dpqrnfPae
d1u3da1  ( 198 )    eddsekgsnallarawspgwsnGdkaLttFIn--gpLley-sknrrkAds
d2wq7a2  ( 216 )               gpnkFpggeteAlrrMeesLkdeiwVArFekpntaPNsl
                                       aaaaaaaaaaaa     333           

                             60        70        80        90        100 
d1iqra1  ( 207 )    e-ggsrLspyfAlgvLsprlAaweAerrg-----------geGArkWvae
d1np7a1  ( 246 )    adyssKFspWlAlgcLsprfIyqeVkrYEqer------vsndSThwlife
d1owla1  ( 238 )    a-gtsgLspAlkfgaIgirqAwqaAsaahals---rsdearnSIrvWQqe
d1u3da1  ( 245 )    a-ttsfLsphlhfgeVsvrkVfhlVrikqvawanegneaGeeSVnlFlks
d2wq7a2  ( 255 )    epsttVLsPYlkfgcLsarlFnqkLkeIikrqp-----khsqppvsliGq
                           aaaaa     aaaaaaaaaaaaaa          aaaaaaaaa

                             110       120       130       140       150 
d1iqra1  ( 245 )    llwrdfSyhLlyhfpwMaerPldprFqaFpwqedealFqaWyeGkTgVPL
d1np7a1  ( 290 )    llwrdfFrfvaqkygnkLfnrgGLlnknfpWqedqvrfelWrsGqTGYPL
d1owla1  ( 284 )    lawrefyqhAlyhfpsLadGPyrslWqqFpWenreaLftaWtqAqTGyPI
d1u3da1  ( 294 )    iglreySryisfnhpySherpllghLkfFpwavdenyfkaWrqGrTGYPL
d2wq7a2  ( 300 )    lmwrefYytvAaaepnFdrmlgNvyCmqIpWqehpdhleaWthGrTGYPF
                    aaaaaaaaaaaa                      aaaaaaaa      aa

                             160       170       180       190       200 
d1iqra1  ( 295 )    VDAAMreLhatGfLsnrArmNAAQFAVK-HLLLpWkrCEeaFrhlLlDgd
d1np7a1  ( 340 )    VDANMrELnltgFMSnrGrqNVASFLCK-NLgIDWrwGAewFescLiDyd
d1owla1  ( 334 )    VDAAMrqLtetgwMHnrCrmIVASFLTK-DLIIdWrrGeqfFmqhLvdGd
d1u3da1  ( 344 )    VDAGMrELwatgwLhdrIrvvVSSFFVK-VLQLpWrwGMkyFwdtLldad
d2wq7a2  ( 350 )    IDAIMrqLrqEgwIHhlArhAVACFLTRGDLWIsWeeGqrvFeqlLldqd
                    aaaaaaaaaaa    aaaaaaaaaaaaa      aaaaaaaaaaa     

                             210       220       230       240       250 
d1iqra1  ( 344 )    ravnLqgWQwaGGLgVdaapyfrVfnpvlQGerhdpegrWLkrwApeYp-
d1np7a1  ( 389 )    vcsnwGnWNytAgIG-ndardfryfnIpkQSqqydpqGtYLrhWLpeLkn
d1owla1  ( 383 )    laanNggWQwSAsSGmdpkp-lrIfnPasQAkkfDatAtYIkrwLpeLrh
d1u3da1  ( 393 )    lesdAlgWQyITGTLpdSrefdrIdnPqfeGykFDpnGeYVrrwLpeLsr
d2wq7a2  ( 400 )    wAlnAGnWMwLSASA-ffhqyfrVysPvafGkktdpqGhYIrkYVpeLsk
                    aaaaaaaaaaa               aaaaaaa     aaaaaa 333  

                             260       270       280       290       300 
d1iqra1  ( 393 )    -----sYapk-------------------dpvvdleeArrrYlrlArd  
d1np7a1  ( 438 )    LpgdkIHqPwlLsateqkqwgVqLgvdYprpcvnfhqsVearrkie    
d1owla1  ( 432 )    VhpkdLisge-Itpierr--------gYpapivnhnlrqkqFkalynqlk
d1u3da1  ( 443 )    LptdwIHhPwnApesvLqaAgIelgsnYplpivgldeAkarLheAlsqMw
d2wq7a2  ( 449 )    YpagcIYePwkAslvdqraygCvlgtdYphrivkhevvhkeNikrMgaAy
                                 aaaa                 aaaaaaaaaaaaa   

                             310 
d1iqra1                        
d1np7a1                        
d1owla1  ( 473 )    aai        
d1u3da1  ( 493 )    qleaa      
d2wq7a2  ( 499 )    kvnrevrtgke
                               

 

 

Domain IDNameFamilySourceDomainSTRING-DB
C-terminal domain of DNA photolyaseCryptochrome/photolyase FAD-binding domainThermus thermophilus [TaxId: 274]view
Cryptochrome C-terminal domainCryptochrome/photolyase FAD-binding domainSynechocystis sp. PCC 6803 [TaxId: 1148]view
C-terminal domain of DNA photolyaseCryptochrome/photolyase FAD-binding domainSynechococcus elongatus [TaxId: 32046]view
Cryptochrome C-terminal domainCryptochrome/photolyase FAD-binding domainThale cress (Arabidopsis thaliana) [TaxId: 3702]view
automated matchesautomated matchesFruit fly (Drosophila melanogaster) [TaxId: 7227]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310
- - - - - - - - - - - - L P L P E P G E E A A L A G L R A F L E - - A K L P R Y - A E E R D R L D G E - G G S R L S P Y F A L G V L S P R L A A W E A E R R G - - - - - - - - - - - G E G A R K W V A E L L W R D F S Y H L L Y H F P W M A E R P L D P R F Q A F P W Q E D E A L F Q A W Y E G K T G V P L V D A A M R E L H A T G F L S N R A R M N A A Q F A V K - H L L L P W K R C E E A F R H L L L D G D R A V N L Q G W Q W A G G L G V D A A P Y F R V F N P V L Q G E R H D P E G R W L K R W A P E Y P - - - - - - S Y A P K - - - - - - - - - - - - - - - - - - - D P V V D L E E A R R R Y L R L A R D - - - - - - - - - - - - -
- - - - - - - - D H R S V L A F Q G G E T A G L A R L Q D Y F W H G D R L K D Y - K E T R N G M V G A D Y S S K F S P W L A L G C L S P R F I Y Q E V K R Y E Q E R - - - - - - V S N D S T H W L I F E L L W R D F F R F V A Q K Y G N K L F N R G G L L N K N F P W Q E D Q V R F E L W R S G Q T G Y P L V D A N M R E L N L T G F M S N R G R Q N V A S F L C K - N L G I D W R W G A E W F E S C L I D Y D V C S N W G N W N Y T A G I G - N D A R D F R Y F N I P K Q S Q Q Y D P Q G T Y L R H W L P E L K N L P G D K I H Q P W L L S A T E Q K Q W G V Q L G V D Y P R P C V N F H Q S V E A R R K I E - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - P V E P G E T A A I A R L Q E F C D - - R A I A D Y - D P Q R N F P A E A - G T S G L S P A L K F G A I G I R Q A W Q A A S A A H A L S - - - R S D E A R N S I R V W Q Q E L A W R E F Y Q H A L Y H F P S L A D G P Y R S L W Q Q F P W E N R E A L F T A W T Q A Q T G Y P I V D A A M R Q L T E T G W M H N R C R M I V A S F L T K - D L I I D W R R G E Q F F M Q H L V D G D L A A N N G G W Q W S A S S G M D P K P - L R I F N P A S Q A K K F D A T A T Y I K R W L P E L R H V H P K D L I S G E - I T P I E R R - - - - - - - - G Y P A P I V N H N L R Q K Q F K A L Y N Q L K A A I - - - - - - - -
E D D S E K G S N A L L A R A W S P G W S N G D K A L T T F I N - - G P L L E Y - S K N R R K A D S A - T T S F L S P H L H F G E V S V R K V F H L V R I K Q V A W A N E G N E A G E E S V N L F L K S I G L R E Y S R Y I S F N H P Y S H E R P L L G H L K F F P W A V D E N Y F K A W R Q G R T G Y P L V D A G M R E L W A T G W L H D R I R V V V S S F F V K - V L Q L P W R W G M K Y F W D T L L D A D L E S D A L G W Q Y I T G T L P D S R E F D R I D N P Q F E G Y K F D P N G E Y V R R W L P E L S R L P T D W I H H P W N A P E S V L Q A A G I E L G S N Y P L P I V G L D E A K A R L H E A L S Q M W Q L E A A - - - - - -
- - - - - - - - - - - G P N K F P G G E T E A L R R M E E S L K D E I W V A R F E K P N T A P N S L E P S T T V L S P Y L K F G C L S A R L F N Q K L K E I I K R Q P - - - - - K H S Q P P V S L I G Q L M W R E F Y Y T V A A A E P N F D R M L G N V Y C M Q I P W Q E H P D H L E A W T H G R T G Y P F I D A I M R Q L R Q E G W I H H L A R H A V A C F L T R G D L W I S W E E G Q R V F E Q L L L D Q D W A L N A G N W M W L S A S A - F F H Q Y F R V Y S P V A F G K K T D P Q G H Y I R K Y V P E L S K Y P A G C I Y E P W K A S L V D Q R A Y G C V L G T D Y P H R I V K H E V V H K E N I K R M G A A Y K V N R E V R T G K E

 

 

 

 

 

Member Chain UniProtKB GO term
d1iqra1 A P61497 GO:0000166
d1iqra1 A P61497 GO:0003677
d1iqra1 A P61497 GO:0003904
d1iqra1 A P61497 GO:0006139
d1iqra1 A P61497 GO:0006281
d1iqra1 A P61497 GO:0006950
d1iqra1 A P61497 GO:0009416
d1iqra1 A P61497 GO:0016829
d1iqra1 A P61497 GO:0071949
d1iqra1 A P61497 GO:0097159
d1iqra1 A P61497 GO:0000166
d1iqra1 A P61497 GO:0003677
d1iqra1 A P61497 GO:0003904
d1iqra1 A P61497 GO:0006139
d1iqra1 A P61497 GO:0006281
d1iqra1 A P61497 GO:0006950
d1iqra1 A P61497 GO:0009416
d1iqra1 A P61497 GO:0016829
d1iqra1 A P61497 GO:0071949
d1iqra1 A P61497 GO:0097159
d1np7a1 A P77967 GO:0000719
d1np7a1 A P77967 GO:0003677
d1np7a1 A P77967 GO:0003913
d1np7a1 A P77967 GO:0006139
d1np7a1 A P77967 GO:0006281
d1np7a1 A P77967 GO:0006950
d1np7a1 A P77967 GO:0071949
d1np7a1 A P77967 GO:0097159
d1np7a1 A P77967 GO:0000719
d1np7a1 A P77967 GO:0003677
d1np7a1 A P77967 GO:0003913
d1np7a1 A P77967 GO:0006139
d1np7a1 A P77967 GO:0006281
d1np7a1 A P77967 GO:0006950
d1np7a1 A P77967 GO:0071949
d1np7a1 A P77967 GO:0097159
d1owla1 A P05327 GO:0000166
d1owla1 A P05327 GO:0003677
d1owla1 A P05327 GO:0003904
d1owla1 A P05327 GO:0006139
d1owla1 A P05327 GO:0006281
d1owla1 A P05327 GO:0006950
d1owla1 A P05327 GO:0009416
d1owla1 A P05327 GO:0016829
d1owla1 A P05327 GO:0071949
d1owla1 A P05327 GO:0097159
d1owla1 A P05327 GO:0000166
d1owla1 A P05327 GO:0003677
d1owla1 A P05327 GO:0003904
d1owla1 A P05327 GO:0006139
d1owla1 A P05327 GO:0006281
d1owla1 A P05327 GO:0006950
d1owla1 A P05327 GO:0009416
d1owla1 A P05327 GO:0016829
d1owla1 A P05327 GO:0071949
d1owla1 A P05327 GO:0097159
d1u3da1 A Q43125 GO:0009785
d1u3da1 A Q43125 GO:0009882
d1u3da1 A Q43125 GO:0009785
d1u3da1 A Q43125 GO:0009882