solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
disulphide bond: cedilla
positive phi: italic x
10 20 30 40 50
d1a5ta1 ( 208 ) dnwqaretLCqaLaySVp---sg---dWysLlaaLnhe------qApaRL
d1iqpa1 ( 233 ) rArpedIreMMllAlk---g----nflkArekLreIllkqglsGedVL
d1jr3a1 ( 243 ) tLd--ddqALsLVeAMve----a---ngerVmalIneAaa-rgIeweaLL
d1jr3d1 ( 212 ) ftpfhWVdaLLm----g---kskrAlhiLqqLrl-egsepviLL
d1sxja1 ( 548 ) alkpfdIAhkMLdGqiysdigsrnftlndkialYfddf-------dfTp
d1sxjb1 ( 231 ) phpliVkkMLl---asn---ledSiqiLrtdLwkkgyssidIV
d1sxjc1 ( 239 ) prpsdlkaVLksIle---d----dwgtAhytlnkvrsakglaLidLI
d1sxjd1 ( 263 ) VphdilieIvekVks---g----dfdeIkkyVntFmksgwsaa-sVv
d1sxje1 ( 256 ) kpdwiivIhkLTrkIvk---ersvnSlieCravLy-dLlahcipaniIL
d2qw6a1 ( 241 ) ydvisaFqksIrg-------sdvdaAlhyLarlvea-g-dlasIC
d3bgea1 ( 251 ) gdrfydlisaLhksVrg-------sapdaAlywYarIlta-ggdplyVA
d3ctda1 ( 259 ) hfdvIsaFIksIrg-------sdpdaTlywLanMvea-gedpnfIF
aaaaaaaaaaa aaaaaaaaa aaaaa
60 70 80 90 100
d1a5ta1 ( 246 ) hwLatLLmDAlkr----------vtnv------dvpglvaeLanhLspsr
d1iqpa1 ( 274 ) vQMhkEVfnLp---------------------------------i-eepk
d1jr3a1 ( 283 ) veMlgLLhrIamVql----sp--aaLgn--dmaaielrMrelArtipptD
d1jr3d1 ( 248 ) rtLqreLllLvnLkrqsahtplraLFdkhrvwqnrrgmMgeAlnrLsqtq
d1sxja1 ( 590 ) lMIqeNyl----sTrPsvlkp-------------------gqshleAvae
d1sxjb1 ( 268 ) ttSfrvTknLa---------------------------------qvkesv
d1sxjc1 ( 279 ) egIvkiLedye---------------------------------lqneeT
d1sxjd1 ( 302 ) nqLheyYitnd---------------------------------nfdtnf
d1sxje1 ( 301 ) keLTfsLldve---------------------------------tLnttn
d2qw6a1 ( 277 ) rrLmvIGye------------------------------------din--
d3bgea1 ( 292 ) rrLlaIAse------------------------------------DVgnA
d3ctda1 ( 297 ) rrLliSAce------------------------------------dIglA
aaaaaaa aaa
110 120 130 140 150
d1a5ta1 ( 286 ) LqaIlgdVchIreqLms----vgnrellItdLLlrIehylqpgvvl
d1iqpa1 ( 290 ) kvlLadkIgeYnfrLveg--a--neiiqLeaLLaqFtlIgkk
d1jr3a1 ( 325 ) IqlYyqtLliGrkeLpya--p--drrmgVemTLlrALafHprmplpep
d1jr3d1 ( 298 ) LrqAvqlltrTeltlkqd--ygqsVwaeLegLSllLChkplad
d1sxja1 ( 617 ) AancislGdivekkirsseqlwsllplhAvlsSvyPAskVAGhmag----
d1sxjb1 ( 285 ) rleMikeIglthmrIleg--v--gtylqLasMLakIhklnnk
d1sxjc1 ( 296 ) rvhLltkLadieysiskg--g--ndqiqgsaVIgAIkasfen
d1sxjd1 ( 319 ) knqIswllftTdsrlnng--t--nehiqllnLLvkIsql
d1sxje1 ( 318 ) kssIieyssvfderlslg--n--kaifhLegFIakVMccLd
d2qw6a1 ( 292 ) -paAaarTvnaVlaAekl--glpeAripLadVVvdLClsp
d3bgea1 ( 306 ) DprAmqvAlaAwdcftrv--gayeGeraIaqAIiyLSvapkSnavytafn
d3ctda1 ( 311 ) dpnAivvVqsccdafd-v--gfpeGlffLsqASlyLAispkSnstsi---
aaaaaaaaaaaaaaa aaaaaaaaaaaaaa
160 170 180 190 200
d1a5ta1
d1iqpa1
d1jr3a1
d1jr3d1
d1sxja1 ( 663 ) ----------------------------------rinfTawlgqnsksak
d1sxjb1
d1sxjc1
d1sxjd1
d1sxje1
d2qw6a1
d3bgea1 ( 354 ) takqqakdlpdydvpphlrnapt-----nlaGenyfppelkdtqyyfPtn
d3ctda1 ( 357 ) --faaik-----lvpnhlknnanylnphnylqqeylpd------lfwpk-
210
d1a5ta1
d1iqpa1
d1jr3a1
d1jr3d1
d1sxja1 ( 679 ) yyrllqeihyhtrlg
d1sxjb1
d1sxjc1
d1sxjd1
d1sxje1
d2qw6a1
d3bgea1 ( 420 ) rgmEiqikeklerlr
d3ctda1 ( 414 ) -gwEknky
| Domain ID | Name | Family | Source | Domain | STRING-DB |
|---|---|---|---|---|---|
| delta prime subunit | DNA polymerase III clamp loader subunits, C-terminal domain | Escherichia coli [TaxId: 562] |  | view | |
| Replication factor C | DNA polymerase III clamp loader subunits, C-terminal domain | Pyrococcus furiosus [TaxId: 2261] |  | view | |
| gamma subunit | DNA polymerase III clamp loader subunits, C-terminal domain | Escherichia coli [TaxId: 562] |  | view | |
| delta subunit | DNA polymerase III clamp loader subunits, C-terminal domain | Escherichia coli [TaxId: 562] |  | view | |
| Replication factor C1 | DNA polymerase III clamp loader subunits, C-terminal domain | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view | |
| Replication factor C4 | DNA polymerase III clamp loader subunits, C-terminal domain | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view | |
| Replication factor C3 | DNA polymerase III clamp loader subunits, C-terminal domain | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view | |
| Replication factor C2 | DNA polymerase III clamp loader subunits, C-terminal domain | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view | |
| Replication factor C5 | DNA polymerase III clamp loader subunits, C-terminal domain | Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] |  | view | |
| Uncharacterized protein EfaeDRAFT_0938 | MgsA/YrvN C-terminal domain-like | Enterococcus faecium [TaxId: 1352] |  | view | |
| Uncharacterized protein NTHI1458 | MgsA/YrvN C-terminal domain-like | Haemophilus influenzae [TaxId: 727] |  | view | |
| Uncharacterized protein YrvN | MgsA/YrvN C-terminal domain-like | Prochlorococcus marinus [TaxId: 1219] |  | view |
| Domain ID | Name |
|---|---|
| d2gnoa1 | 2gno A:209-306 |
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| D | N | W | Q | A | R | E | T | L | C | Q | A | L | A | Y | S | V | P | - | - | - | S | G | - | - | - | D | W | Y | S | L | L | A | A | L | N | H | E | - | - | - | - | - | - | Q | A | P | A | R | L | H | W | L | A | T | L | L | M | D | A | L | K | R | - | - | - | - | - | - | - | - | - | - | V | T | N | V | - | - | - | - | - | - | D | V | P | G | L | V | A | E | L | A | N | H | L | S | P | S | R | L | Q | A | I | L | G | D | V | C | H | I | R | E | Q | L | M | S | - | - | - | - | V | G | N | R | E | L | L | I | T | D | L | L | L | R | I | E | H | Y | L | Q | P | G | V | V | L | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | R | A | R | P | E | D | I | R | E | M | M | L | L | A | L | K | - | - | - | G | - | - | - | - | N | F | L | K | A | R | E | K | L | R | E | I | L | L | K | Q | G | L | S | G | E | D | V | L | V | Q | M | H | K | E | V | F | N | L | P | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | I | - | E | E | P | K | K | V | L | L | A | D | K | I | G | E | Y | N | F | R | L | V | E | G | - | - | A | - | - | N | E | I | I | Q | L | E | A | L | L | A | Q | F | T | L | I | G | K | K | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| T | L | D | - | - | D | D | Q | A | L | S | L | V | E | A | M | V | E | - | - | - | - | A | - | - | - | N | G | E | R | V | M | A | L | I | N | E | A | A | A | - | R | G | I | E | W | E | A | L | L | V | E | M | L | G | L | L | H | R | I | A | M | V | Q | L | - | - | - | - | S | P | - | - | A | A | L | G | N | - | - | D | M | A | A | I | E | L | R | M | R | E | L | A | R | T | I | P | P | T | D | I | Q | L | Y | Y | Q | T | L | L | I | G | R | K | E | L | P | Y | A | - | - | P | - | - | D | R | R | M | G | V | E | M | T | L | L | R | A | L | A | F | H | P | R | M | P | L | P | E | P | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | F | T | P | F | H | W | V | D | A | L | L | M | - | - | - | - | G | - | - | - | K | S | K | R | A | L | H | I | L | Q | Q | L | R | L | - | E | G | S | E | P | V | I | L | L | R | T | L | Q | R | E | L | L | L | L | V | N | L | K | R | Q | S | A | H | T | P | L | R | A | L | F | D | K | H | R | V | W | Q | N | R | R | G | M | M | G | E | A | L | N | R | L | S | Q | T | Q | L | R | Q | A | V | Q | L | L | T | R | T | E | L | T | L | K | Q | D | - | - | Y | G | Q | S | V | W | A | E | L | E | G | L | S | L | L | L | C | H | K | P | L | A | D | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | A | L | K | P | F | D | I | A | H | K | M | L | D | G | Q | I | Y | S | D | I | G | S | R | N | F | T | L | N | D | K | I | A | L | Y | F | D | D | F | - | - | - | - | - | - | - | D | F | T | P | L | M | I | Q | E | N | Y | L | - | - | - | - | S | T | R | P | S | V | L | K | P | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | G | Q | S | H | L | E | A | V | A | E | A | A | N | C | I | S | L | G | D | I | V | E | K | K | I | R | S | S | E | Q | L | W | S | L | L | P | L | H | A | V | L | S | S | V | Y | P | A | S | K | V | A | G | H | M | A | G | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | R | I | N | F | T | A | W | L | G | Q | N | S | K | S | A | K | Y | Y | R | L | L | Q | E | I | H | Y | H | T | R | L | G |
| - | - | - | - | - | - | - | P | H | P | L | I | V | K | K | M | L | L | - | - | - | A | S | N | - | - | - | L | E | D | S | I | Q | I | L | R | T | D | L | W | K | K | G | Y | S | S | I | D | I | V | T | T | S | F | R | V | T | K | N | L | A | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | Q | V | K | E | S | V | R | L | E | M | I | K | E | I | G | L | T | H | M | R | I | L | E | G | - | - | V | - | - | G | T | Y | L | Q | L | A | S | M | L | A | K | I | H | K | L | N | N | K | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | P | R | P | S | D | L | K | A | V | L | K | S | I | L | E | - | - | - | D | - | - | - | - | D | W | G | T | A | H | Y | T | L | N | K | V | R | S | A | K | G | L | A | L | I | D | L | I | E | G | I | V | K | I | L | E | D | Y | E | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | L | Q | N | E | E | T | R | V | H | L | L | T | K | L | A | D | I | E | Y | S | I | S | K | G | - | - | G | - | - | N | D | Q | I | Q | G | S | A | V | I | G | A | I | K | A | S | F | E | N | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | V | P | H | D | I | L | I | E | I | V | E | K | V | K | S | - | - | - | G | - | - | - | - | D | F | D | E | I | K | K | Y | V | N | T | F | M | K | S | G | W | S | A | A | - | S | V | V | N | Q | L | H | E | Y | Y | I | T | N | D | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | N | F | D | T | N | F | K | N | Q | I | S | W | L | L | F | T | T | D | S | R | L | N | N | G | - | - | T | - | - | N | E | H | I | Q | L | L | N | L | L | V | K | I | S | Q | L | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | K | P | D | W | I | I | V | I | H | K | L | T | R | K | I | V | K | - | - | - | E | R | S | V | N | S | L | I | E | C | R | A | V | L | Y | - | D | L | L | A | H | C | I | P | A | N | I | I | L | K | E | L | T | F | S | L | L | D | V | E | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | T | L | N | T | T | N | K | S | S | I | I | E | Y | S | S | V | F | D | E | R | L | S | L | G | - | - | N | - | - | K | A | I | F | H | L | E | G | F | I | A | K | V | M | C | C | L | D | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | Y | D | V | I | S | A | F | Q | K | S | I | R | G | - | - | - | - | - | - | - | S | D | V | D | A | A | L | H | Y | L | A | R | L | V | E | A | - | G | - | D | L | A | S | I | C | R | R | L | M | V | I | G | Y | E | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | D | I | N | - | - | - | P | A | A | A | A | R | T | V | N | A | V | L | A | A | E | K | L | - | - | G | L | P | E | A | R | I | P | L | A | D | V | V | V | D | L | C | L | S | P | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | G | D | R | F | Y | D | L | I | S | A | L | H | K | S | V | R | G | - | - | - | - | - | - | - | S | A | P | D | A | A | L | Y | W | Y | A | R | I | L | T | A | - | G | G | D | P | L | Y | V | A | R | R | L | L | A | I | A | S | E | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | D | V | G | N | A | D | P | R | A | M | Q | V | A | L | A | A | W | D | C | F | T | R | V | - | - | G | A | Y | E | G | E | R | A | I | A | Q | A | I | I | Y | L | S | V | A | P | K | S | N | A | V | Y | T | A | F | N | T | A | K | Q | Q | A | K | D | L | P | D | Y | D | V | P | P | H | L | R | N | A | P | T | - | - | - | - | - | N | L | A | G | E | N | Y | F | P | P | E | L | K | D | T | Q | Y | Y | F | P | T | N | R | G | M | E | I | Q | I | K | E | K | L | E | R | L | R |
| - | - | - | - | H | F | D | V | I | S | A | F | I | K | S | I | R | G | - | - | - | - | - | - | - | S | D | P | D | A | T | L | Y | W | L | A | N | M | V | E | A | - | G | E | D | P | N | F | I | F | R | R | L | L | I | S | A | C | E | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | D | I | G | L | A | D | P | N | A | I | V | V | V | Q | S | C | C | D | A | F | D | - | V | - | - | G | F | P | E | G | L | F | F | L | S | Q | A | S | L | Y | L | A | I | S | P | K | S | N | S | T | S | I | - | - | - | - | - | F | A | A | I | K | - | - | - | - | - | L | V | P | N | H | L | K | N | N | A | N | Y | L | N | P | H | N | Y | L | Q | Q | E | Y | L | P | D | - | - | - | - | - | - | L | F | W | P | K | - | - | G | W | E | K | N | K | Y | - | - | - | - | - | - | - |
