PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1g4wr1  ( 171 )                 lldiAlkgLkrTLpqLeqmdgnslr-----------p
d1he1a1  (  96 )    ssavvfkqmvlqqaLpmtlkgLd-kAseLatltpegLareHsrLAsgdgA
d1hy5a-  (1100 )           tsfsdsikqlAaetlp-kyqqLnsLdae-LqknHdqfAtgsgP
                                  aaaaaaa                             

                             60        70        80        90        100 
d1g4wr1  ( 208 )    lrsLmtNLqnLnk-----qlndyvttltniqVgvArFsqW-----everw
d1he1a1  ( 145 )    LrsLstALagIraGSqveeSriqAgrLLersIGgiaLqqWGttggaAsql
d1hy5a-  (1143 )    LrgsItqCqgL-qfCgg-elqaeAsaIlntpVcgipFsqWGtiggaAsay
                    aaaaaaaaaa        aaaaaaaaaa                  aaaa

                             110       120       130   
d1g4wr1  ( 258 )    vd-AstheLtqAVkkIhvIAkeLknVtaeLeki  
d1he1a1  ( 195 )    VldAspelrreITdqLhqVmseValLrqaVesevs
d1hy5a-  (1192 )    vasgv--dLtqAAneIkgLaqq-qkLlsl      
                    a        aaaaaaaaaaaa   aaaa

Domains
Outliers

Domain ID	Name	Family	Source	STRING-DB
d1g4wr1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1g4wr1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	SptP tyrosine phosphatase	Bacterial GAP domain	Salmonella typhimurium [TaxId: 90371]	view
d1he1a1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1he1a1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	ExoS toxin	Bacterial GAP domain	Pseudomonas aeruginosa [TaxId: 287]	view
d1hy5a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1hy5a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	YopE	Bacterial GAP domain	Yersinia pestis [TaxId: 632]	view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term
d1g4wr1	R	P74873	GO:0004725
d1g4wr1	R	P74873	GO:0006470
d1g4wr1	R	P74873	GO:0016311
d1g4wr1	R	P74873	GO:0004725
d1g4wr1	R	P74873	GO:0006470
d1g4wr1	R	P74873	GO:0016311
d1g4wr1	R	P74873	GO:0004725
d1g4wr1	R	P74873	GO:0006470
d1g4wr1	R	P74873	GO:0016311
d1hy5a_	A	P31493	GO:0005096
d1hy5a_	A	P31493	GO:0050765

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