Superfamily : 46609 [ Fe,Mn superoxide dismutase (SOD), N-terminal domain ]
Class : All alpha proteins
Fold : Long alpha-hairpin
# of Members : 9
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1coja1  (   3 )             hklepkdhlkPqn-Le--gisneqIephFeahYkgyVakYn
d1ix9a1  (   1 )              sytlpsLpyaydaLep-hfdkqtMeihhtkhHqtyVnnAn
d1my6a1  (   1 )              afvqepLpfdpgaLepygmsaktLefhygkhHkgyVdnLn
d2cw3a1  (   5 )             ssglrmtLpygleaLep-visaatVdfhynkhHqgyIqkLl
d3ak2a1  (   1 )         mvsfkryelppLpynynaLep-yiieeiMklhhqkhHntyVkgAn
d3ceia1  (   1 )              mftlreLpfakdsMgd-flspvaFdfhhgkhHqtyVnnLn
d4f2na1  (  22 )    cyhtlphlrYpAelptLgfnydGiqp-vmsprqLelhyskhHsayvdkLn
d4f6ea1  (   2 )               vtlpdl-wdfgalep-yisgqiNelhyt-hHqtyVngfn
d6gsca1  (  23 )                                     meihyskhHagytanln
                                                  aaaaaaaaa aaaaaaaaaa

                             60        70        80        90        100 
d1coja1  (  41 )    eiqekladqnfA-drskanqnyseyrelkveetfnymgVvlhelyFgmlt
d1ix9a1  (  40 )    aaLeslpefanlpVeeLitkldqLpadkktvLrnnAgghAnhslfWkglk
d1my6a1  (  41 )    klTqdt-eladksledVirtTyg-daak-vgifnnAaqVwnhtffWnslk
d2cw3a1  (  45 )    datg--lpesrInLkslvtlg---pdrAgenvfnAAgqIynhNmyWlsmv
d3ak2a1  (  45 )    aAlekiekhlk--gei-----qidvravmrdfsfnyaghimhtifWpnma
d3ceia1  (  40 )    nlIkgt-dfeksslfaIltkSs-------ggvfnnAaqIynhdfyWdcls
d4f2na1  (  72 )    tlGg----yegkTIeeIilaTtgi----nsvmfnqAaqHfnhSffWkcls
d4f6ea1  (  40 )    tAvdqfqelsd--llaepspanarmiaiqqni-fhgggftnhclfWenla
d6gsca1  (  40 )    kaiagt-pAekesienIlakvsqys----daVrnnAgghynhelfwsilt
                    aaa          aa              aaaaaaaaaaaaaaaaaa   

                         
d1coja1  (  90 )    p    
d1ix9a1  (  90 )    k    
d1my6a1  (  88 )    p    
d2cw3a1  (  90 )    p    
d3ak2a1  (  88 )    ppgkg
d3ceia1  (  82 )    pk--a
d4f2na1  ( 117 )    p    
d4f6ea1  (  90 )    p    
d6gsca1  (  85 )    pn--k
                         

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Fe superoxide dismutase (FeSOD)Fe,Mn superoxide dismutase (SOD), N-terminal domainAquifex pyrophilus [TaxId: 2714]view
Mn superoxide dismutase (MnSOD)Fe,Mn superoxide dismutase (SOD), N-terminal domainEscherichia coli [TaxId: 562]view
Fe superoxide dismutase (FeSOD)Fe,Mn superoxide dismutase (SOD), N-terminal domainThermosynechococcus elongatus [TaxId: 146786]view
automated matchesautomated matchesPerkinsus marinus [TaxId: 31276]view
automated matchesautomated matchesAeropyrum pernix [TaxId: 272557]view
automated matchesautomated matchesHelicobacter pylori [TaxId: 210]view
automated matchesautomated matchesLeishmania major [TaxId: 5664]view
automated matchesautomated matchesBaker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]view
automated matchesautomated matchesSphingobacterium spiritivorum [TaxId: 258]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100
- - - - - - - - - H K L E P K D H L K P Q N - L E - - G I S N E Q I E P H F E A H Y K G Y V A K Y N E I Q E K L A D Q N F A - D R S K A N Q N Y S E Y R E L K V E E T F N Y M G V V L H E L Y F G M L T P - - - -
- - - - - - - - - - S Y T L P S L P Y A Y D A L E P - H F D K Q T M E I H H T K H H Q T Y V N N A N A A L E S L P E F A N L P V E E L I T K L D Q L P A D K K T V L R N N A G G H A N H S L F W K G L K K - - - -
- - - - - - - - - - A F V Q E P L P F D P G A L E P Y G M S A K T L E F H Y G K H H K G Y V D N L N K L T Q D T - E L A D K S L E D V I R T T Y G - D A A K - V G I F N N A A Q V W N H T F F W N S L K P - - - -
- - - - - - - - - S S G L R M T L P Y G L E A L E P - V I S A A T V D F H Y N K H H Q G Y I Q K L L D A T G - - L P E S R I N L K S L V T L G - - - P D R A G E N V F N A A G Q I Y N H N M Y W L S M V P - - - -
- - - - - M V S F K R Y E L P P L P Y N Y N A L E P - Y I I E E I M K L H H Q K H H N T Y V K G A N A A L E K I E K H L K - - G E I - - - - - Q I D V R A V M R D F S F N Y A G H I M H T I F W P N M A P P G K G
- - - - - - - - - - M F T L R E L P F A K D S M G D - F L S P V A F D F H H G K H H Q T Y V N N L N N L I K G T - D F E K S S L F A I L T K S S - - - - - - - G G V F N N A A Q I Y N H D F Y W D C L S P K - - A
C Y H T L P H L R Y P A E L P T L G F N Y D G I Q P - V M S P R Q L E L H Y S K H H S A Y V D K L N T L G G - - - - Y E G K T I E E I I L A T T G I - - - - N S V M F N Q A A Q H F N H S F F W K C L S P - - - -
- - - - - - - - - - - V T L P D L - W D F G A L E P - Y I S G Q I N E L H Y T - H H Q T Y V N G F N T A V D Q F Q E L S D - - L L A E P S P A N A R M I A I Q Q N I - F H G G G F T N H C L F W E N L A P - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E I H Y S K H H A G Y T A N L N K A I A G T - P A E K E S I E N I L A K V S Q Y S - - - - D A V R N N A G G H Y N H E L F W S I L T P N - - K

 

 

 

 

 

Member Chain UniProtKB GO term
d1coja1 A Q9X6W9 GO:0004784
d1coja1 A Q9X6W9 GO:0006801
d1coja1 A Q9X6W9 GO:0016491
d1coja1 A Q9X6W9 GO:0019430
d1coja1 A Q9X6W9 GO:0046872
d1coja1 A Q9X6W9 GO:0004784
d1coja1 A Q9X6W9 GO:0006801
d1coja1 A Q9X6W9 GO:0016491
d1coja1 A Q9X6W9 GO:0019430
d1coja1 A Q9X6W9 GO:0046872
d1ix9a1 A P00448 GO:0003677
d1ix9a1 A P00448 GO:0004784
d1ix9a1 A P00448 GO:0005737
d1ix9a1 A P00448 GO:0005829
d1ix9a1 A P00448 GO:0006801
d1ix9a1 A P00448 GO:0006979
d1ix9a1 A P00448 GO:0009408
d1ix9a1 A P00448 GO:0010447
d1ix9a1 A P00448 GO:0016209
d1ix9a1 A P00448 GO:0016491
d1ix9a1 A P00448 GO:0019430
d1ix9a1 A P00448 GO:0030145
d1ix9a1 A P00448 GO:0042803
d1ix9a1 A P00448 GO:0046872
d1ix9a1 A P00448 GO:0071291
d1ix9a1 A P00448 GO:0003677
d1ix9a1 A P00448 GO:0004784
d1ix9a1 A P00448 GO:0005737
d1ix9a1 A P00448 GO:0005829
d1ix9a1 A P00448 GO:0006801
d1ix9a1 A P00448 GO:0006979
d1ix9a1 A P00448 GO:0009408
d1ix9a1 A P00448 GO:0010447
d1ix9a1 A P00448 GO:0016209
d1ix9a1 A P00448 GO:0016491
d1ix9a1 A P00448 GO:0019430
d1ix9a1 A P00448 GO:0030145
d1ix9a1 A P00448 GO:0042803
d1ix9a1 A P00448 GO:0046872
d1ix9a1 A P00448 GO:0071291
d1my6a1 A Q8DIR2 GO:0004784
d1my6a1 A Q8DIR2 GO:0006801
d1my6a1 A Q8DIR2 GO:0016491
d1my6a1 A Q8DIR2 GO:0019430
d1my6a1 A Q8DIR2 GO:0046872