PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d2l7pa1  (  12 )    mv-vdvtiedsystesaWvrCdd--cfkwRripasv-vgsidessrWiCm
d2rr4a1  ( 246 )    eisg-------fGqclvwvqCsfpnCgkwRrlcgnidpsvlp--dnWsCd
                                     bbb        bbb                 33

                             60        70        80        90    
d2l7pa1  (  58 )    nnsdkrfadcsksqemsneeineelGigqdeadaydcdaakrg  
d2rr4a1  ( 287 )    qntdvqynrcdipeetwt------------------------gle
                    3

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d2l7pa1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2l7pa1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Histone-lysine N-methyltransferase ASHH2	CW-type zinc finger	Thale cress (Arabidopsis thaliana) [TaxId: 3702]		view
d2rr4a1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2rr4a1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	zf-CW and PWWP domain containing protein 1 (ZCWPW1)	CW-type zinc finger	Human (Homo sapiens) [TaxId: 9606]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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M	V	-	V	D	V	T	I	E	D	S	Y	S	T	E	S	A	W	V	R	C	D	D	-	-	C	F	K	W	R	R	I	P	A	S	V	-	V	G	S	I	D	E	S	S	R	W	I	C	M	N	N	S	D	K	R	F	A	D	C	S	K	S	Q	E	M	S	N	E	E	I	N	E	E	L	G	I	G	Q	D	E	A	D	A	Y	D	C	D	A	A	K	R	G	-	-
E	I	S	G	-	-	-	-	-	-	-	F	G	Q	C	L	V	W	V	Q	C	S	F	P	N	C	G	K	W	R	R	L	C	G	N	I	D	P	S	V	L	P	-	-	D	N	W	S	C	D	Q	N	T	D	V	Q	Y	N	R	C	D	I	P	E	E	T	W	T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	L	E

Member	Chain	UniProtKB	GO term

									10										20										30										40										50										60										70										80										90
M	V	-	V	D	V	T	I	E	D	S	Y	S	T	E	S	A	W	V	R	C	D	D	-	-	C	F	K	W	R	R	I	P	A	S	V	-	V	G	S	I	D	E	S	S	R	W	I	C	M	N	N	S	D	K	R	F	A	D	C	S	K	S	Q	E	M	S	N	E	E	I	N	E	E	L	G	I	G	Q	D	E	A	D	A	Y	D	C	D	A	A	K	R	G	-	-
E	I	S	G	-	-	-	-	-	-	-	F	G	Q	C	L	V	W	V	Q	C	S	F	P	N	C	G	K	W	R	R	L	C	G	N	I	D	P	S	V	L	P	-	-	D	N	W	S	C	D	Q	N	T	D	V	Q	Y	N	R	C	D	I	P	E	E	T	W	T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	L	E

									10										20										30										40										50										60										70										80										90
M	V	-	V	D	V	T	I	E	D	S	Y	S	T	E	S	A	W	V	R	C	D	D	-	-	C	F	K	W	R	R	I	P	A	S	V	-	V	G	S	I	D	E	S	S	R	W	I	C	M	N	N	S	D	K	R	F	A	D	C	S	K	S	Q	E	M	S	N	E	E	I	N	E	E	L	G	I	G	Q	D	E	A	D	A	Y	D	C	D	A	A	K	R	G	-	-
E	I	S	G	-	-	-	-	-	-	-	F	G	Q	C	L	V	W	V	Q	C	S	F	P	N	C	G	K	W	R	R	L	C	G	N	I	D	P	S	V	L	P	-	-	D	N	W	S	C	D	Q	N	T	D	V	Q	Y	N	R	C	D	I	P	E	E	T	W	T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	L	E

									10										20										30										40										50										60										70										80										90
M	V	-	V	D	V	T	I	E	D	S	Y	S	T	E	S	A	W	V	R	C	D	D	-	-	C	F	K	W	R	R	I	P	A	S	V	-	V	G	S	I	D	E	S	S	R	W	I	C	M	N	N	S	D	K	R	F	A	D	C	S	K	S	Q	E	M	S	N	E	E	I	N	E	E	L	G	I	G	Q	D	E	A	D	A	Y	D	C	D	A	A	K	R	G	-	-
E	I	S	G	-	-	-	-	-	-	-	F	G	Q	C	L	V	W	V	Q	C	S	F	P	N	C	G	K	W	R	R	L	C	G	N	I	D	P	S	V	L	P	-	-	D	N	W	S	C	D	Q	N	T	D	V	Q	Y	N	R	C	D	I	P	E	E	T	W	T	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	L	E