PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d2jo1a-  (   1 )    esp---kehdpftydyqslqigglviagilfilgilivlsrrcrckfnqq
d2jp3a-  (   1 )    ngpvdkg------spfyydwe-slqlgglifggllciagialalsgkckc
                                        a aaaaaaaaaaaaaaaaaaaaaa  a   

                             60        70        80  
d2jo1a-  (  48 )    qrtgepdeeegtfrssirrlstrrr     
d2jp3a-  (  44 )    rrnhtp------sslpekvtplitpgsast
                                       aaa

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d2jo1a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2jo1a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Sodium/potassium-transporting ATPase regulatory protein FXYD1	ATP1G1/PLM/MAT8-like (FXYD-like)	Human (Homo sapiens) [TaxId: 9606]		view
d2jp3a- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2jp3a- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Sodium/potassium-transporting ATPase regulatory protein FXYD4 (CHIF)	ATP1G1/PLM/MAT8-like (FXYD-like)	Human (Homo sapiens) [TaxId: 9606]		view

Domain ID	Name
d2zxeg-	2zxe G:
d3wgue-	3wgu E:

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

									10										20										30										40										50										60										70										80
E	S	P	-	-	-	K	E	H	D	P	F	T	Y	D	Y	Q	S	L	Q	I	G	G	L	V	I	A	G	I	L	F	I	L	G	I	L	I	V	L	S	R	R	C	R	C	K	F	N	Q	Q	Q	R	T	G	E	P	D	E	E	E	G	T	F	R	S	S	I	R	R	L	S	T	R	R	R	-	-	-	-	-
N	G	P	V	D	K	G	-	-	-	-	-	-	S	P	F	Y	Y	D	W	E	-	S	L	Q	L	G	G	L	I	F	G	G	L	L	C	I	A	G	I	A	L	A	L	S	G	K	C	K	C	R	R	N	H	T	P	-	-	-	-	-	-	S	S	L	P	E	K	V	T	P	L	I	T	P	G	S	A	S	T

Member	Chain	UniProtKB	GO term

									10										20										30										40										50										60										70										80
E	S	P	-	-	-	K	E	H	D	P	F	T	Y	D	Y	Q	S	L	Q	I	G	G	L	V	I	A	G	I	L	F	I	L	G	I	L	I	V	L	S	R	R	C	R	C	K	F	N	Q	Q	Q	R	T	G	E	P	D	E	E	E	G	T	F	R	S	S	I	R	R	L	S	T	R	R	R	-	-	-	-	-
N	G	P	V	D	K	G	-	-	-	-	-	-	S	P	F	Y	Y	D	W	E	-	S	L	Q	L	G	G	L	I	F	G	G	L	L	C	I	A	G	I	A	L	A	L	S	G	K	C	K	C	R	R	N	H	T	P	-	-	-	-	-	-	S	S	L	P	E	K	V	T	P	L	I	T	P	G	S	A	S	T

									10										20										30										40										50										60										70										80
E	S	P	-	-	-	K	E	H	D	P	F	T	Y	D	Y	Q	S	L	Q	I	G	G	L	V	I	A	G	I	L	F	I	L	G	I	L	I	V	L	S	R	R	C	R	C	K	F	N	Q	Q	Q	R	T	G	E	P	D	E	E	E	G	T	F	R	S	S	I	R	R	L	S	T	R	R	R	-	-	-	-	-
N	G	P	V	D	K	G	-	-	-	-	-	-	S	P	F	Y	Y	D	W	E	-	S	L	Q	L	G	G	L	I	F	G	G	L	L	C	I	A	G	I	A	L	A	L	S	G	K	C	K	C	R	R	N	H	T	P	-	-	-	-	-	-	S	S	L	P	E	K	V	T	P	L	I	T	P	G	S	A	S	T

									10										20										30										40										50										60										70										80
E	S	P	-	-	-	K	E	H	D	P	F	T	Y	D	Y	Q	S	L	Q	I	G	G	L	V	I	A	G	I	L	F	I	L	G	I	L	I	V	L	S	R	R	C	R	C	K	F	N	Q	Q	Q	R	T	G	E	P	D	E	E	E	G	T	F	R	S	S	I	R	R	L	S	T	R	R	R	-	-	-	-	-
N	G	P	V	D	K	G	-	-	-	-	-	-	S	P	F	Y	Y	D	W	E	-	S	L	Q	L	G	G	L	I	F	G	G	L	L	C	I	A	G	I	A	L	A	L	S	G	K	C	K	C	R	R	N	H	T	P	-	-	-	-	-	-	S	S	L	P	E	K	V	T	P	L	I	T	P	G	S	A	S	T