PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d3fkea-  ( 218 )     disakdLrniMydhLpgfgtafHqLVqVICklGkdsnsldiIhaeFqaS
d6dkua-  ( 158 )    lpldpteFvrvLtgyLtgprtAfhELVsAIAmvSrdshDLqvAmdHFnrE
                        aaaaaaaaa        aaaaaaaaaaaa      aaaaaaaaaaa

                             60        70        80        90        100 
d3fkea-  ( 267 )    laegdspqcALiqITkrVpiFqdaaPpvihirsrgdIpraCqksLrpvpp
d6dkua-  ( 208 )    lmdgfsahaAIisITqrceyFrnceApttqvtsksqIpraYhrrLrdvpe
                    aa    aaaaaaaaaaa          bbb   333  333333 b    

                             110       120   
d3fkea-  ( 317 )    -spkIdrgwVCvFqLqdgktlGLki
d6dkua-  ( 258 )    gpktLgrgWVyiYlTp-egslGLki
                            bbbbbbb    bbbbb

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d3fkea- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d3fkea- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Filoviridae VP35	Filoviridae VP35	Zaire ebolavirus - Mayinga (Zaire, 1976) [TaxId: 128952]		view
d6dkua- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d6dkua- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	automated matches	Myotis lucifugus [TaxId: 59463]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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-	D	I	S	A	K	D	L	R	N	I	M	Y	D	H	L	P	G	F	G	T	A	F	H	Q	L	V	Q	V	I	C	K	L	G	K	D	S	N	S	L	D	I	I	H	A	E	F	Q	A	S	L	A	E	G	D	S	P	Q	C	A	L	I	Q	I	T	K	R	V	P	I	F	Q	D	A	A	P	P	V	I	H	I	R	S	R	G	D	I	P	R	A	C	Q	K	S	L	R	P	V	P	P	-	S	P	K	I	D	R	G	W	V	C	V	F	Q	L	Q	D	G	K	T	L	G	L	K	I
L	P	L	D	P	T	E	F	V	R	V	L	T	G	Y	L	T	G	P	R	T	A	F	H	E	L	V	S	A	I	A	M	V	S	R	D	S	H	D	L	Q	V	A	M	D	H	F	N	R	E	L	M	D	G	F	S	A	H	A	A	I	I	S	I	T	Q	R	C	E	Y	F	R	N	C	E	A	P	T	T	Q	V	T	S	K	S	Q	I	P	R	A	Y	H	R	R	L	R	D	V	P	E	G	P	K	T	L	G	R	G	W	V	Y	I	Y	L	T	P	-	E	G	S	L	G	L	K	I

Member	Chain	UniProtKB	GO term

									10										20										30										40										50										60										70										80										90										100										110										120
-	D	I	S	A	K	D	L	R	N	I	M	Y	D	H	L	P	G	F	G	T	A	F	H	Q	L	V	Q	V	I	C	K	L	G	K	D	S	N	S	L	D	I	I	H	A	E	F	Q	A	S	L	A	E	G	D	S	P	Q	C	A	L	I	Q	I	T	K	R	V	P	I	F	Q	D	A	A	P	P	V	I	H	I	R	S	R	G	D	I	P	R	A	C	Q	K	S	L	R	P	V	P	P	-	S	P	K	I	D	R	G	W	V	C	V	F	Q	L	Q	D	G	K	T	L	G	L	K	I
L	P	L	D	P	T	E	F	V	R	V	L	T	G	Y	L	T	G	P	R	T	A	F	H	E	L	V	S	A	I	A	M	V	S	R	D	S	H	D	L	Q	V	A	M	D	H	F	N	R	E	L	M	D	G	F	S	A	H	A	A	I	I	S	I	T	Q	R	C	E	Y	F	R	N	C	E	A	P	T	T	Q	V	T	S	K	S	Q	I	P	R	A	Y	H	R	R	L	R	D	V	P	E	G	P	K	T	L	G	R	G	W	V	Y	I	Y	L	T	P	-	E	G	S	L	G	L	K	I

									10										20										30										40										50										60										70										80										90										100										110										120
-	D	I	S	A	K	D	L	R	N	I	M	Y	D	H	L	P	G	F	G	T	A	F	H	Q	L	V	Q	V	I	C	K	L	G	K	D	S	N	S	L	D	I	I	H	A	E	F	Q	A	S	L	A	E	G	D	S	P	Q	C	A	L	I	Q	I	T	K	R	V	P	I	F	Q	D	A	A	P	P	V	I	H	I	R	S	R	G	D	I	P	R	A	C	Q	K	S	L	R	P	V	P	P	-	S	P	K	I	D	R	G	W	V	C	V	F	Q	L	Q	D	G	K	T	L	G	L	K	I
L	P	L	D	P	T	E	F	V	R	V	L	T	G	Y	L	T	G	P	R	T	A	F	H	E	L	V	S	A	I	A	M	V	S	R	D	S	H	D	L	Q	V	A	M	D	H	F	N	R	E	L	M	D	G	F	S	A	H	A	A	I	I	S	I	T	Q	R	C	E	Y	F	R	N	C	E	A	P	T	T	Q	V	T	S	K	S	Q	I	P	R	A	Y	H	R	R	L	R	D	V	P	E	G	P	K	T	L	G	R	G	W	V	Y	I	Y	L	T	P	-	E	G	S	L	G	L	K	I

									10										20										30										40										50										60										70										80										90										100										110										120
-	D	I	S	A	K	D	L	R	N	I	M	Y	D	H	L	P	G	F	G	T	A	F	H	Q	L	V	Q	V	I	C	K	L	G	K	D	S	N	S	L	D	I	I	H	A	E	F	Q	A	S	L	A	E	G	D	S	P	Q	C	A	L	I	Q	I	T	K	R	V	P	I	F	Q	D	A	A	P	P	V	I	H	I	R	S	R	G	D	I	P	R	A	C	Q	K	S	L	R	P	V	P	P	-	S	P	K	I	D	R	G	W	V	C	V	F	Q	L	Q	D	G	K	T	L	G	L	K	I
L	P	L	D	P	T	E	F	V	R	V	L	T	G	Y	L	T	G	P	R	T	A	F	H	E	L	V	S	A	I	A	M	V	S	R	D	S	H	D	L	Q	V	A	M	D	H	F	N	R	E	L	M	D	G	F	S	A	H	A	A	I	I	S	I	T	Q	R	C	E	Y	F	R	N	C	E	A	P	T	T	Q	V	T	S	K	S	Q	I	P	R	A	Y	H	R	R	L	R	D	V	P	E	G	P	K	T	L	G	R	G	W	V	Y	I	Y	L	T	P	-	E	G	S	L	G	L	K	I