PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d4emta1  ( 155 )     vAhglAwsYyigyLrlILpeLqaRIrtYnqhynnlLrgaVsqrLYILLP
d5cfla1  ( 193 )    nvAdglAwsYyfgyLkfVLpeLekqIektskFrs--k-ekFVkkMFILIP
                      aaaaaaaaaa  aaaa   aaaaa   aaa            bbbbbb

                             60        70        80        90        100 
d4emta1  ( 204 )    ldCgvpdnLs---adp--nIrfldkLpqd---------rvysNsIyeLle
d5cfla1  ( 240 )    snCfwddkIpgsdyDpqnrItfegnTeplektrggvflrhYkHsVyeIkd
                                       bbbbbb                  bbbbb  

                             110       120       130       140       150 
d4emta1  ( 250 )    ngqragTCVLeyAtpLqtLfaSqysqag-fsredrleqAklFcrtLediL
d5cfla1  ( 290 )    genepwFCIMeYAtpLltLydmSvaqpgeLsreeRdaqvvvFlrkLqdIL
                         bbbbbbb   aaaaa           aaaaaaaaaaaaaaaaaaa

                             160       170       180       190 
d4emta1  ( 300 )    adapeSqnnCrLIayqepaddssfsLSqeVLrhlrqee     
d5cfla1  ( 340 )    egdraCqgkyeLVtFsp--d---rdLAdvMlrkLkdSeleigg
                    a        bbbbbb          aaaaaaaaa

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d4emta1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d4emta1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Tyrosinase cofactor MelC1	Tyrosinase cofactor MelC1	Human (Homo sapiens) [TaxId: 9606]		view
d5cfla1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d5cfla1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	automated matches	Nematostella vectensis [TaxId: 45351]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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Member	Chain	UniProtKB	GO term

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