Superfamily : 254132 [ PA C-terminal domain-like ]
Class : Multi-domain proteins (alpha and beta)
Fold : PA C-terminal domain-like
# of Members : 2
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d4iuja-  ( 266 )              rpLlpdgppCSQrSkFLLmdalkLsiedPshgegipLyDA
d5d9aa3  ( 238 )    ikHyeqnkfrqIrlpkgpmApYtHkFLMeEAwmftkisdperSrageiLI
                                                     bbbb          aaa

                             60        70        80        90        100 
d4iuja-  ( 308 )    ICmrt--ffgwkePnvvkphkGinpnYllSWkqVlaElqdieniprtknM
d5d9aa3  ( 288 )    dffkkgnlsairPkdkplqGk-ypihyknLWnqIkaAIad------rtmV
                                           aaaaaaaaaaaaaaaaa          

                             110       120       130       140       150 
d4iuja-  ( 361 )    kktsqLkwALgee-----------------------------lrslasWI
d5d9aa3  ( 331 )    inendhseflggraskkipeisltqdvitteglkqsenklpeprsfPrwF
                        aaaaa                                       aa

                             160       170       180       190       200 
d4iuja-  ( 408 )    qnEFnkACeltds-sWIe-----ldeIgedaap-----ihiasmRrnyFT
d5d9aa3  ( 383 )    naEwmwAikdsdltgWVpmaeyp---------padneledyaehlnktMe
                    aaaaaaaa                                aaaaaaaaaa

                             210       220       230       240       250 
d4iuja-  ( 448 )    aeVshCrATEYImKGvyIntaLlnAScaamddFqLIPMISkCrte-----
d5d9aa3  ( 424 )    gvLqgTNCArEMGKCilTvgaLmtECrlfpgkiKVVPIyArSkerksmqe
                    aaa   aaaaaaaaaaaaaaaaaaaaaa      bbbbbbbbb       

                             260       270       280       290       300 
d4iuja-  ( 494 )    ----grrkTNLYGFIIKGrShLndtdvVnFVSMEFSltdPrlephKWekY
d5d9aa3  ( 474 )    glpvpsemDCLFGICVKSksh---dgmytIITFEFSireP--nlekHqkY
                          bbbbbbbbbbb          bbbbbbbbb              

                             310       320       330       340       350 
d4iuja-  ( 541 )    CVLeVGdmllrsaighvsrpMFLYVrtngtskikMkwgmeMrrcLlqSLq
d5d9aa3  ( 523 )    TVFeAghttvrm--kkrevpLyLYCRttaLskikNdwlskArrcfitTmd
                    bbbbbbbbb        bbbbbbbbbbbbb aaaaaaaa   aaaaaaaa

                             360       370       380       390       400 
d4iuja-  ( 591 )    qIesmIeaessvkekdmTefFenspgveeg---------sigkvCrtlLA
d5d9aa3  ( 577 )    tVetiClresakaeenlvektlnekqmwigkkngeliaqpLreALrvqLV
                    aaaaaaaaaaaaa                              aaaaaaa

                             410       420       430       440       450 
d4iuja-  ( 643 )    kSVFnslYaspqLegFsaes-kLllivqald--------nlggly-aIe-
d5d9aa3  ( 627 )    qqFYfcIYndsqLegFcneqkkilmalegdkknkssfgfnpeglLekIee
                    aaaaaaa   aaaaaaaaa   aaaaaaa                     

                             460       470       480 
d4iuja-  ( 693 )    cLinDPWVLLnAswfnslth            
d5d9aa3  ( 677 )    cLinNPMCLFmAqrlnelVieaSkrgakFfkt
                         aaaaaaaaaaa
 

 

Domain IDNameFamilySourceDomainSTRING-DB
PA C-terminal domainPA C-terminal domain-likeInfluenza A virus (strain a/wilson-smith/1933 h1n1) [TaxId: 381518]view
P3 C-terminal domainPA C-terminal domain-likeInfluenza C virus (strain c/johannesburg/1/1966) [TaxId: 100673]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480
- - - - - - - - - - R P L L P D G P P C S Q R S K F L L M D A L K L S I E D P S H G E G I P L Y D A I C M R T - - F F G W K E P N V V K P H K G I N P N Y L L S W K Q V L A E L Q D I E N I P R T K N M K K T S Q L K W A L G E E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L R S L A S W I Q N E F N K A C E L T D S - S W I E - - - - - L D E I G E D A A P - - - - - I H I A S M R R N Y F T A E V S H C R A T E Y I M K G V Y I N T A L L N A S C A A M D D F Q L I P M I S K C R T E - - - - - - - - - G R R K T N L Y G F I I K G R S H L N D T D V V N F V S M E F S L T D P R L E P H K W E K Y C V L E V G D M L L R S A I G H V S R P M F L Y V R T N G T S K I K M K W G M E M R R C L L Q S L Q Q I E S M I E A E S S V K E K D M T E F F E N S P G V E E G - - - - - - - - - S I G K V C R T L L A K S V F N S L Y A S P Q L E G F S A E S - K L L L I V Q A L D - - - - - - - - N L G G L Y - A I E - C L I N D P W V L L N A S W F N S L T H - - - - - - - - - - - -
I K H Y E Q N K F R Q I R L P K G P M A P Y T H K F L M E E A W M F T K I S D P E R S R A G E I L I D F F K K G N L S A I R P K D K P L Q G K - Y P I H Y K N L W N Q I K A A I A D - - - - - - R T M V I N E N D H S E F L G G R A S K K I P E I S L T Q D V I T T E G L K Q S E N K L P E P R S F P R W F N A E W M W A I K D S D L T G W V P M A E Y P - - - - - - - - - P A D N E L E D Y A E H L N K T M E G V L Q G T N C A R E M G K C I L T V G A L M T E C R L F P G K I K V V P I Y A R S K E R K S M Q E G L P V P S E M D C L F G I C V K S K S H - - - D G M Y T I I T F E F S I R E P - - N L E K H Q K Y T V F E A G H T T V R M - - K K R E V P L Y L Y C R T T A L S K I K N D W L S K A R R C F I T T M D T V E T I C L R E S A K A E E N L V E K T L N E K Q M W I G K K N G E L I A Q P L R E A L R V Q L V Q Q F Y F C I Y N D S Q L E G F C N E Q K K I L M A L E G D K K N K S S F G F N P E G L L E K I E E C L I N N P M C L F M A Q R L N E L V I E A S K R G A K F F K T

 

 

 

 

 

Member Chain UniProtKB GO term
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in