PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d2h5na1  (   1 )                    mglgrqslnimtFsgqelTAIIkMAksMVmadgk
d2ou3a1  (   2 )    sdiklgsswiInwffgfn--------qiptnedSSiy-kSvLtcAkag--
                                                  aaaaaa   aaaaaaa    

                             60        70        80        90        100 
d2h5na1  (  35 )    ikpaeiavMtreFmrFgilqdqvdlllkaSdsieas-qAvaLIarMd-ee
d2ou3a1  (  45 )    ispeekdwalgfcasWgva----dwViedLktyeAdealeeViarSpqVs
                      aaaaaaaaaaa          aaaaaaa        aaaaa       

                             110       120       130       140       150 
d2h5na1  (  83 )    rkkyVASYLGvIMAsdgdIddnelalWtlistlCgLptmt---vmeAinn
d2ou3a1  (  92 )    aqrdILlsAIwVSAadg--LekekakIr--AtiLgIkeiVdqleqlyyye
                     aaaaaaaaaaa         aaaaaa                aaaaaaa

                             160      
d2h5na1  ( 130 )    Mkn               
d2ou3a1  ( 143 )    aalrqkrlnllypqkspy
                    a

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d2h5na1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2h5na1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Hypothetical protein PG1108	PG1108-like	Porphyromonas gingivalis [TaxId: 837]		view
d2ou3a1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2ou3a1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Tellurite resistance protein of COG3793	COG3793-like	Nostoc punctiforme pcc 73102 [TaxId: 63737]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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S	D	I	K	L	G	S	S	W	I	I	N	W	F	F	G	F	N	-	-	-	-	-	-	-	-	Q	I	P	T	N	E	D	S	S	I	Y	-	K	S	V	L	T	C	A	K	A	G	-	-	I	S	P	E	E	K	D	W	A	L	G	F	C	A	S	W	G	V	A	-	-	-	-	D	W	V	I	E	D	L	K	T	Y	E	A	D	E	A	L	E	E	V	I	A	R	S	P	Q	V	S	A	Q	R	D	I	L	L	S	A	I	W	V	S	A	A	D	G	-	-	L	E	K	E	K	A	K	I	R	-	-	A	T	I	L	G	I	K	E	I	V	D	Q	L	E	Q	L	Y	Y	Y	E	A	A	L	R	Q	K	R	L	N	L	L	Y	P	Q	K	S	P	Y

Member	Chain	UniProtKB	GO term
d2h5na1	A	Q7MVF6	GO:0046872

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S	D	I	K	L	G	S	S	W	I	I	N	W	F	F	G	F	N	-	-	-	-	-	-	-	-	Q	I	P	T	N	E	D	S	S	I	Y	-	K	S	V	L	T	C	A	K	A	G	-	-	I	S	P	E	E	K	D	W	A	L	G	F	C	A	S	W	G	V	A	-	-	-	-	D	W	V	I	E	D	L	K	T	Y	E	A	D	E	A	L	E	E	V	I	A	R	S	P	Q	V	S	A	Q	R	D	I	L	L	S	A	I	W	V	S	A	A	D	G	-	-	L	E	K	E	K	A	K	I	R	-	-	A	T	I	L	G	I	K	E	I	V	D	Q	L	E	Q	L	Y	Y	Y	E	A	A	L	R	Q	K	R	L	N	L	L	Y	P	Q	K	S	P	Y

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-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	M	G	L	G	R	Q	S	L	N	I	M	T	F	S	G	Q	E	L	T	A	I	I	K	M	A	K	S	M	V	M	A	D	G	K	I	K	P	A	E	I	A	V	M	T	R	E	F	M	R	F	G	I	L	Q	D	Q	V	D	L	L	L	K	A	S	D	S	I	E	A	S	-	Q	A	V	A	L	I	A	R	M	D	-	E	E	R	K	K	Y	V	A	S	Y	L	G	V	I	M	A	S	D	G	D	I	D	D	N	E	L	A	L	W	T	L	I	S	T	L	C	G	L	P	T	M	T	-	-	-	V	M	E	A	I	N	N	M	K	N	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
S	D	I	K	L	G	S	S	W	I	I	N	W	F	F	G	F	N	-	-	-	-	-	-	-	-	Q	I	P	T	N	E	D	S	S	I	Y	-	K	S	V	L	T	C	A	K	A	G	-	-	I	S	P	E	E	K	D	W	A	L	G	F	C	A	S	W	G	V	A	-	-	-	-	D	W	V	I	E	D	L	K	T	Y	E	A	D	E	A	L	E	E	V	I	A	R	S	P	Q	V	S	A	Q	R	D	I	L	L	S	A	I	W	V	S	A	A	D	G	-	-	L	E	K	E	K	A	K	I	R	-	-	A	T	I	L	G	I	K	E	I	V	D	Q	L	E	Q	L	Y	Y	Y	E	A	A	L	R	Q	K	R	L	N	L	L	Y	P	Q	K	S	P	Y

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-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	M	G	L	G	R	Q	S	L	N	I	M	T	F	S	G	Q	E	L	T	A	I	I	K	M	A	K	S	M	V	M	A	D	G	K	I	K	P	A	E	I	A	V	M	T	R	E	F	M	R	F	G	I	L	Q	D	Q	V	D	L	L	L	K	A	S	D	S	I	E	A	S	-	Q	A	V	A	L	I	A	R	M	D	-	E	E	R	K	K	Y	V	A	S	Y	L	G	V	I	M	A	S	D	G	D	I	D	D	N	E	L	A	L	W	T	L	I	S	T	L	C	G	L	P	T	M	T	-	-	-	V	M	E	A	I	N	N	M	K	N	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
S	D	I	K	L	G	S	S	W	I	I	N	W	F	F	G	F	N	-	-	-	-	-	-	-	-	Q	I	P	T	N	E	D	S	S	I	Y	-	K	S	V	L	T	C	A	K	A	G	-	-	I	S	P	E	E	K	D	W	A	L	G	F	C	A	S	W	G	V	A	-	-	-	-	D	W	V	I	E	D	L	K	T	Y	E	A	D	E	A	L	E	E	V	I	A	R	S	P	Q	V	S	A	Q	R	D	I	L	L	S	A	I	W	V	S	A	A	D	G	-	-	L	E	K	E	K	A	K	I	R	-	-	A	T	I	L	G	I	K	E	I	V	D	Q	L	E	Q	L	Y	Y	Y	E	A	A	L	R	Q	K	R	L	N	L	L	Y	P	Q	K	S	P	Y