Superfamily : 143113 [ NAP-like ]
Class : Alpha and beta proteins (a+b)
Fold : NAP-like
# of Members : 5
Superposed Structure
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d2ayua1  (  70 )    iqdrlgslvgqdsgyvgglpknvkekllslktlqselfevekefqvemfe
d5gpla-  (   2 )                                eaaqafenlanleqefgkaeie
d5x7va-  (  30 )                              mqdfediqkdieqldikcaheqmn
d6k02a1  (  10 )           glltnfdmiqalplnvkqrvcalknlqmktiqieSdfykrvhe
d7mtoa1  (  23 )                     tsekeqqeaiehidevqneidrlneqaseeilk
                                               aaaaaaaaaaaaaaaaaaaaaaa

                             60        70        80        90        100 
d2ayua1  ( 120 )    lenkfLqkykpiweqrsriisGqeqpkpeqiakgq-eiveslnetell--
d5gpla-  (  24 )    ilkkqnelfqplfeqrrdiLk-----------------------------
d5x7va-  (  54 )    iqkqydekkkplfekrDeiIq-----------------------------
d6k02a1  (  54 )    leiefegkfkstfdqrkaivageveptkeqidtpileglegdqlaelyka
d7mtoa1  (  56 )    veqkynklrqpffqkrselia-----------------------------
                    aaaaaaaaaaaaaaaaaaaa                              

                             110       120       130       140       150 
d2ayua1  ( 167 )    vdeeeqvkgipsFWltALenL-piVcdtitdrDaeVLeyLqdIgLeyl-t
d5gpla-  (  45 )    --------tinnFWVvVLeaAgdeIsqyitpeDsvLLekLenIyVerfne
d5x7va-  (  75 )    --------kipgFWAnTLrkh-paLs-dIVpeDidILnhLvkLdLkd-nm
d6k02a1  ( 104 )    aeadpsakgikdFWLtALrth-dlVaeaIeehDvpILsyLtDVttaAs-k
d7mtoa1  (  77 )    --------kipnFWvttFvnH-pqvsallgeeDeeAlhyltrvevtef-e
                                aaaaaaa            aaaaaa  bbbbbbb    

                             160       170       180       190       200 
d2ayua1  ( 224 )    dgrpGFkLlFrFdssaNpfFt--ndiLçKtYfyqkelgy-----sgdfiy
d5gpla-  (  87 )    kePrDVrIsLtFq--pneyLqddnltLvKeVrIkeekakddeglekkitk
d5x7va-  ( 114 )    dnngSYkItFiFgekAkefMp---ltLvKhVtfdn---------------
d6k02a1  ( 153 )    --paGFkIeFhFa--tNpyFk--nqvLtKtYlLgFdPdaeaplqFdgphv
d7mtoa1  ( 117 )    diksgyridFyFd--enpYFe--nkvlsKeFhlne---------sgd---
                         bbbbbbb             bbbbbbbb                 

                             210       220       230       240       250 
d2ayua1  ( 267 )    dhAeGçeIswkdnahnVtvdlemrkqtiekitpieSFFnfFdppkiqned
d5gpla-  ( 135 )    ytSqpvdIhwkp-gkslfrk---nkkl------ppnFFDYFqWtgeee--
d5x7va-  ( 148 )    qevveCtIkwke-gknPiaa------------pkwSIFeWFtt-------
d6k02a1  ( 197 )    irAvGdtIewed-gknvtkk-----a-----tvkaSFFnfFeppe-----
d7mtoa1  ( 151 )    psSkSteikwks-gkdltke-------------pesFFtwFtdhs-----
                    bbb                                 33333         

                             260       270       280       290   
d2ayua1  ( 326 )    qdeeleedleerlaldysIGeqLkdkLIprAvdWftgaAlefefe
d5gpla-  ( 173 )    ----------dddFdGatLTifLAedLFpnAvkyfteamteeasd
d5x7va-  ( 192 )    ------------dldkpdVGelIrreIwhnPlsyyl         
d6k02a1  ( 261 )    -------qaeefleldyemGqaIrdtIIprAvlFytgels     
d7mtoa1  ( 198 )    -----------dAgad-elGevikddiWpnPlqyylvp-----dm
                                     aaaaaaaa      aaaa
 

 

Domain IDNameFamilySourceDomainSTRING-DB
Nucleosome assembly protein, NAPNAP-likeBaker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]view
automated matchesautomated matchesSchizosaccharomyces pombe [TaxId: 284812]view
automated matchesautomated matchesMalaria parasite (Plasmodium falciparum) [TaxId: 5833]view
automated matchesautomated matchesNematode (Caenorhabditis elegans) [TaxId: 6239]view
Protein SETNAP-likeHuman (Homo sapiens) [TaxId: 9606]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
I Q D R L G S L V G Q D S G Y V G G L P K N V K E K L L S L K T L Q S E L F E V E K E F Q V E M F E L E N K F L Q K Y K P I W E Q R S R I I S G Q E Q P K P E Q I A K G Q - E I V E S L N E T E L L - - V D E E E Q V K G I P S F W L T A L E N L - P I V C D T I T D R D A E V L E Y L Q D I G L E Y L - T D G R P G F K L L F R F D S S A N P F F T - - N D I L C K T Y F Y Q K E L G Y - - - - - S G D F I Y D H A E G C E I S W K D N A H N V T V D L E M R K Q T I E K I T P I E S F F N F F D P P K I Q N E D Q D E E L E E D L E E R L A L D Y S I G E Q L K D K L I P R A V D W F T G A A L E F E F E
- - - - - - - - - - - - - - - - - - - - - - - - - - - - E A A Q A F E N L A N L E Q E F G K A E I E I L K K Q N E L F Q P L F E Q R R D I L K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T I N N F W V V V L E A A G D E I S Q Y I T P E D S V L L E K L E N I Y V E R F N E K E P R D V R I S L T F Q - - P N E Y L Q D D N L T L V K E V R I K E E K A K D D E G L E K K I T K Y T S Q P V D I H W K P - G K S L F R K - - - N K K L - - - - - - P P N F F D Y F Q W T G E E E - - - - - - - - - - - - D D D F D G A T L T I F L A E D L F P N A V K Y F T E A M T E E A S D
- - - - - - - - - - - - - - - - - - - - - - - - - - M Q D F E D I Q K D I E Q L D I K C A H E Q M N I Q K Q Y D E K K K P L F E K R D E I I Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K I P G F W A N T L R K H - P A L S - D I V P E D I D I L N H L V K L D L K D - N M D N N G S Y K I T F I F G E K A K E F M P - - - L T L V K H V T F D N - - - - - - - - - - - - - - - Q E V V E C T I K W K E - G K N P I A A - - - - - - - - - - - - P K W S I F E W F T T - - - - - - - - - - - - - - - - - - - D L D K P D V G E L I R R E I W H N P L S Y Y L - - - - - - - - -
- - - - - - - G L L T N F D M I Q A L P L N V K Q R V C A L K N L Q M K T I Q I E S D F Y K R V H E L E I E F E G K F K S T F D Q R K A I V A G E V E P T K E Q I D T P I L E G L E G D Q L A E L Y K A A E A D P S A K G I K D F W L T A L R T H - D L V A E A I E E H D V P I L S Y L T D V T T A A S - K - - P A G F K I E F H F A - - T N P Y F K - - N Q V L T K T Y L L G F D P D A E A P L Q F D G P H V I R A V G D T I E W E D - G K N V T K K - - - - - A - - - - - T V K A S F F N F F E P P E - - - - - - - - - - - - Q A E E F L E L D Y E M G Q A I R D T I I P R A V L F Y T G E L S - - - - -
- - - - - - - - - - - - - - - - - T S E K E Q Q E A I E H I D E V Q N E I D R L N E Q A S E E I L K V E Q K Y N K L R Q P F F Q K R S E L I A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K I P N F W V T T F V N H - P Q V S A L L G E E D E E A L H Y L T R V E V T E F - E D I K S G Y R I D F Y F D - - E N P Y F E - - N K V L S K E F H L N E - - - - - - - - - S G D - - - P S S K S T E I K W K S - G K D L T K E - - - - - - - - - - - - - P E S F F T W F T D H S - - - - - - - - - - - - - - - - D A G A D - E L G E V I K D D I W P N P L Q Y Y L V P - - - - - D M

 

 

 

 

 

Member Chain UniProtKB GO term
d2ayua1 A P25293 GO:0000785
d2ayua1 A P25293 GO:0000920
d2ayua1 A P25293 GO:0000921
d2ayua1 A P25293 GO:0003677
d2ayua1 A P25293 GO:0003682
d2ayua1 A P25293 GO:0005515
d2ayua1 A P25293 GO:0005634
d2ayua1 A P25293 GO:0005737
d2ayua1 A P25293 GO:0005935
d2ayua1 A P25293 GO:0006334
d2ayua1 A P25293 GO:0006337
d2ayua1 A P25293 GO:0006607
d2ayua1 A P25293 GO:0007117
d2ayua1 A P25293 GO:0008047
d2ayua1 A P25293 GO:0030332
d2ayua1 A P25293 GO:0031116
d2ayua1 A P25293 GO:0032153
d2ayua1 A P25293 GO:0032174
d2ayua1 A P25293 GO:0032968
d2ayua1 A P25293 GO:0042274
d2ayua1 A P25293 GO:0042393
d2ayua1 A P25293 GO:0042802
d2ayua1 A P25293 GO:0051082
d2ayua1 A P25293 GO:0098841
d2ayua1 A P25293 GO:1990317
d2ayua1 A P25293 GO:2000617
 
Contact: Prof. R. Sowdhamini - mini@ncbs.res.in