PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d2ixma1  (  23 )               fiiPkkeIhtvpdmgkWkrSqAyadYigfIltLNegVkg
d2ixna1  (   4 )                  ekrll-tpddmklWeespTrahFtkFIidLAesVkg
d2ixoa1  (   2 )    sldrVdwphatFstPvkrIfdtqttldFqsSlAIhRIkyHLhkYTtlISh
                                             aa    aaaaaaaaaaaaaaa    

                             60        70        80        90        100 
d2ixma1  (  62 )    k-kltfeyr-v-seaIekLlaLLntLdrwIdetppvdqpsrfGnkAYrtW
d2ixna1  (  39 )    h-ensqykepi-sesInsMmnLLsqIkdiTqkhpvik---rfgkveFrdF
d2ixoa1  (  52 )    csdPdphatassiamVngLmgVLdkLahLIdeTpplpg---yGNlACreW
                                 aaaaaaaaaaaaaaa                 aaaaa

                             110       120       130       140       150 
d2ixma1  ( 109 )    yakLdeeAenlVatVVpthlaaAvpEVAvYLkeSVGnstrIdYgtghEAa
d2ixna1  (  89 )    ydeVsrnSrkILrseFpsLtdeqLeqLsiYLdeSWGnkrridYgsghELN
d2ixoa1  ( 102 )    HhkLderLpqwLqemLpseyheVvpELqyYLGnSFGsstrLdYgtghELS
                    aaaaaaaaaaaaa          aaaaaaaaa         bb aaaaaa

                             160       170       180       190       200 
d2ixma1  ( 159 )    FAAFLCCLckigVLr-vdDqiAIVFkVFnrYLeVMrkLQktYrMepagsq
d2ixna1  ( 139 )    FMCLLyGLysygiFnlsnDsTNLVLkVFieYlkIMriLEtkYwLepagsh
d2ixoa1  ( 152 )    FMATVAALdMLgmFp--hHrGaDVFlLFnkYYtIMrrLIltYtLepa---
                    aaaaaaaaaa          aaaaa aaaaaaaaaaaaaaa   bb    

                             210       220       230       240       250 
d2ixma1  ( 208 )    gvwgLddfqFLPFIWGSSQLidhp---yLePrHFvdekAVnenhkdYMFL
d2ixna1  ( 189 )    gvwgLDdyHFLPFLFGAfQLtthk---hLkPisIhnnelVemfahrYLYF
d2ixoa1  ( 203 )    ---gLddhFHLVYILGSSQWqlldaqApLqPreIldkslVreykdtNFYC
                              aaaaaaaaa           33333 aaaaaaa    aaa

                             260       270       280       290       300 
d2ixma1  ( 255 )    eCIlfItemkt-gpfaehsnqLwnisa-vpsWskVNqgLirmYkaeCLek
d2ixna1  ( 236 )    gCIafInkvkssasLrwhSpmLddiSg-vktWskVAegMikmYkaeVLsk
d2ixoa1  ( 250 )    qGInfinevkm-gpfeehSpiLydiAvtvprWskVCkgLlkmYsveVEkk
                    aaaaaaaaa     aaaa aaaaaa      aaaaaaaaaaaaaaa    

                             310       320 
d2ixma1  ( 303 )    fpvIqhFkFGs-lLpihpvts
d2ixna1  ( 285 )    lpiMqhFyFSe-FLpc     
d2ixoa1  ( 299 )    fpvVqhFwFGtGFFpwvni  
                    aaaa

Domains
Outliers

Domain ID	Name	Family	Source	STRING-DB
d2ixma1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2ixma1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA	PTPA-like	Human (Homo sapiens) [TaxId: 9606]	view
d2ixna1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2ixna1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA	PTPA-like	Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]	view
d2ixoa1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2ixoa1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA	PTPA-like	Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]	view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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S	L	D	R	V	D	W	P	H	A	T	F	S	T	P	V	K	R	I	F	D	T	Q	T	T	L	D	F	Q	S	S	L	A	I	H	R	I	K	Y	H	L	H	K	Y	T	T	L	I	S	H	C	S	D	P	D	P	H	A	T	A	S	S	I	A	M	V	N	G	L	M	G	V	L	D	K	L	A	H	L	I	D	E	T	P	P	L	P	G	-	-	-	Y	G	N	L	A	C	R	E	W	H	H	K	L	D	E	R	L	P	Q	W	L	Q	E	M	L	P	S	E	Y	H	E	V	V	P	E	L	Q	Y	Y	L	G	N	S	F	G	S	S	T	R	L	D	Y	G	T	G	H	E	L	S	F	M	A	T	V	A	A	L	D	M	L	G	M	F	P	-	-	H	H	R	G	A	D	V	F	L	L	F	N	K	Y	Y	T	I	M	R	R	L	I	L	T	Y	T	L	E	P	A	-	-	-	-	-	-	G	L	D	D	H	F	H	L	V	Y	I	L	G	S	S	Q	W	Q	L	L	D	A	Q	A	P	L	Q	P	R	E	I	L	D	K	S	L	V	R	E	Y	K	D	T	N	F	Y	C	Q	G	I	N	F	I	N	E	V	K	M	-	G	P	F	E	E	H	S	P	I	L	Y	D	I	A	V	T	V	P	R	W	S	K	V	C	K	G	L	L	K	M	Y	S	V	E	V	E	K	K	F	P	V	V	Q	H	F	W	F	G	T	G	F	F	P	W	V	N	I	-	-

Member	Chain	UniProtKB	GO term
d2ixma1	A	Q15257	GO:0019211
d2ixna1	A	Q12461	GO:0019211
d2ixoa1	A	P40454	GO:0019211

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-	-	-	-	-	-	-	-	-	-	-	F	I	I	P	K	K	E	I	H	T	V	P	D	M	G	K	W	K	R	S	Q	A	Y	A	D	Y	I	G	F	I	L	T	L	N	E	G	V	K	G	K	-	K	L	T	F	E	Y	R	-	V	-	S	E	A	I	E	K	L	L	A	L	L	N	T	L	D	R	W	I	D	E	T	P	P	V	D	Q	P	S	R	F	G	N	K	A	Y	R	T	W	Y	A	K	L	D	E	E	A	E	N	L	V	A	T	V	V	P	T	H	L	A	A	A	V	P	E	V	A	V	Y	L	K	E	S	V	G	N	S	T	R	I	D	Y	G	T	G	H	E	A	A	F	A	A	F	L	C	C	L	C	K	I	G	V	L	R	-	V	D	D	Q	I	A	I	V	F	K	V	F	N	R	Y	L	E	V	M	R	K	L	Q	K	T	Y	R	M	E	P	A	G	S	Q	G	V	W	G	L	D	D	F	Q	F	L	P	F	I	W	G	S	S	Q	L	I	D	H	P	-	-	-	Y	L	E	P	R	H	F	V	D	E	K	A	V	N	E	N	H	K	D	Y	M	F	L	E	C	I	L	F	I	T	E	M	K	T	-	G	P	F	A	E	H	S	N	Q	L	W	N	I	S	A	-	V	P	S	W	S	K	V	N	Q	G	L	I	R	M	Y	K	A	E	C	L	E	K	F	P	V	I	Q	H	F	K	F	G	S	-	L	L	P	I	H	P	V	T	S
-	-	-	-	-	-	-	-	-	-	-	-	-	-	E	K	R	L	L	-	T	P	D	D	M	K	L	W	E	E	S	P	T	R	A	H	F	T	K	F	I	I	D	L	A	E	S	V	K	G	H	-	E	N	S	Q	Y	K	E	P	I	-	S	E	S	I	N	S	M	M	N	L	L	S	Q	I	K	D	I	T	Q	K	H	P	V	I	K	-	-	-	R	F	G	K	V	E	F	R	D	F	Y	D	E	V	S	R	N	S	R	K	I	L	R	S	E	F	P	S	L	T	D	E	Q	L	E	Q	L	S	I	Y	L	D	E	S	W	G	N	K	R	R	I	D	Y	G	S	G	H	E	L	N	F	M	C	L	L	Y	G	L	Y	S	Y	G	I	F	N	L	S	N	D	S	T	N	L	V	L	K	V	F	I	E	Y	L	K	I	M	R	I	L	E	T	K	Y	W	L	E	P	A	G	S	H	G	V	W	G	L	D	D	Y	H	F	L	P	F	L	F	G	A	F	Q	L	T	T	H	K	-	-	-	H	L	K	P	I	S	I	H	N	N	E	L	V	E	M	F	A	H	R	Y	L	Y	F	G	C	I	A	F	I	N	K	V	K	S	S	A	S	L	R	W	H	S	P	M	L	D	D	I	S	G	-	V	K	T	W	S	K	V	A	E	G	M	I	K	M	Y	K	A	E	V	L	S	K	L	P	I	M	Q	H	F	Y	F	S	E	-	F	L	P	C	-	-	-	-	-
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									10										20										30										40										50										60										70										80										90										100										110										120										130										140										150										160										170										180										190										200										210										220										230										240										250										260										270										280										290										300										310										320
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S	L	D	R	V	D	W	P	H	A	T	F	S	T	P	V	K	R	I	F	D	T	Q	T	T	L	D	F	Q	S	S	L	A	I	H	R	I	K	Y	H	L	H	K	Y	T	T	L	I	S	H	C	S	D	P	D	P	H	A	T	A	S	S	I	A	M	V	N	G	L	M	G	V	L	D	K	L	A	H	L	I	D	E	T	P	P	L	P	G	-	-	-	Y	G	N	L	A	C	R	E	W	H	H	K	L	D	E	R	L	P	Q	W	L	Q	E	M	L	P	S	E	Y	H	E	V	V	P	E	L	Q	Y	Y	L	G	N	S	F	G	S	S	T	R	L	D	Y	G	T	G	H	E	L	S	F	M	A	T	V	A	A	L	D	M	L	G	M	F	P	-	-	H	H	R	G	A	D	V	F	L	L	F	N	K	Y	Y	T	I	M	R	R	L	I	L	T	Y	T	L	E	P	A	-	-	-	-	-	-	G	L	D	D	H	F	H	L	V	Y	I	L	G	S	S	Q	W	Q	L	L	D	A	Q	A	P	L	Q	P	R	E	I	L	D	K	S	L	V	R	E	Y	K	D	T	N	F	Y	C	Q	G	I	N	F	I	N	E	V	K	M	-	G	P	F	E	E	H	S	P	I	L	Y	D	I	A	V	T	V	P	R	W	S	K	V	C	K	G	L	L	K	M	Y	S	V	E	V	E	K	K	F	P	V	V	Q	H	F	W	F	G	T	G	F	F	P	W	V	N	I	-	-