PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d2a90a1  (  43 )                      ahavsvWefesr-----gkwlpYspaVsqhLe
d2a90a2  ( 132 )                           kWEwSGgsadsnndwrpYn-hVqsiIe
d2rsfa1  (   8 )    fldkptllspeelkaasrgngeyaWyyegr-----ngwwqydertsrele
                                             bbb         bbb     aaaaa

                             60        70        80        90        100 
d2a90a1  (  70 )    rahakkltrvL---sdadpsleqyyVnVrt-tQesl-----tigVrrfya
d2a90a2  ( 159 )    dAwargeqtld--Lsnthigl-pytInFsnltQlrqp--sgprsIrrtqq
d2rsfa1  (  53 )    dAfskgkknteMlia----gf-lyvAdlenmvqyrrnehgrrrkikrdii
                    aaaa    bb              bbb     bb          bb    

                             110 
d2a90a1  ( 123 )    psspaGkgt    
d2a90a2  ( 205 )    a------pyplvk
d2rsfa1  (  98 )    dipkkgv

Domains
Outliers

Domain ID	Name	Family	Source	STRING-DB
d2a90a1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2a90a1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Deltex (Dx)	WWE domain	Fruit fly (Drosophila melanogaster) [TaxId: 7227]	view
d2a90a2 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2a90a2 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Deltex (Dx)	WWE domain	Fruit fly (Drosophila melanogaster) [TaxId: 7227]	view
d2rsfa1 # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d2rsfa1 # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	automated matches	WWE domain	Mouse (Mus musculus) [TaxId: 10090]	view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	H	A	V	S	V	W	E	F	E	S	R	-	-	-	-	-	G	K	W	L	P	Y	S	P	A	V	S	Q	H	L	E	R	A	H	A	K	K	L	T	R	V	L	-	-	-	S	D	A	D	P	S	L	E	Q	Y	Y	V	N	V	R	T	-	T	Q	E	S	L	-	-	-	-	-	T	I	G	V	R	R	F	Y	A	P	S	S	P	A	G	K	G	T	-	-	-	-
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	K	W	E	W	S	G	G	S	A	D	S	N	N	D	W	R	P	Y	N	-	H	V	Q	S	I	I	E	D	A	W	A	R	G	E	Q	T	L	D	-	-	L	S	N	T	H	I	G	L	-	P	Y	T	I	N	F	S	N	L	T	Q	L	R	Q	P	-	-	S	G	P	R	S	I	R	R	T	Q	Q	A	-	-	-	-	-	-	P	Y	P	L	V	K
F	L	D	K	P	T	L	L	S	P	E	E	L	K	A	A	S	R	G	N	G	E	Y	A	W	Y	Y	E	G	R	-	-	-	-	-	N	G	W	W	Q	Y	D	E	R	T	S	R	E	L	E	D	A	F	S	K	G	K	K	N	T	E	M	L	I	A	-	-	-	-	G	F	-	L	Y	V	A	D	L	E	N	M	V	Q	Y	R	R	N	E	H	G	R	R	R	K	I	K	R	D	I	I	D	I	P	K	K	G	V	-	-	-	-	-	-

Member	Chain	UniProtKB	GO term
d2a90a1	A	Q23985	GO:0008270
d2a90a1	A	Q23985	GO:0008270
d2a90a2	A	Q23985	GO:0008270
d2a90a2	A	Q23985	GO:0008270

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-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	K	W	E	W	S	G	G	S	A	D	S	N	N	D	W	R	P	Y	N	-	H	V	Q	S	I	I	E	D	A	W	A	R	G	E	Q	T	L	D	-	-	L	S	N	T	H	I	G	L	-	P	Y	T	I	N	F	S	N	L	T	Q	L	R	Q	P	-	-	S	G	P	R	S	I	R	R	T	Q	Q	A	-	-	-	-	-	-	P	Y	P	L	V	K
F	L	D	K	P	T	L	L	S	P	E	E	L	K	A	A	S	R	G	N	G	E	Y	A	W	Y	Y	E	G	R	-	-	-	-	-	N	G	W	W	Q	Y	D	E	R	T	S	R	E	L	E	D	A	F	S	K	G	K	K	N	T	E	M	L	I	A	-	-	-	-	G	F	-	L	Y	V	A	D	L	E	N	M	V	Q	Y	R	R	N	E	H	G	R	R	R	K	I	K	R	D	I	I	D	I	P	K	K	G	V	-	-	-	-	-	-

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-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	K	W	E	W	S	G	G	S	A	D	S	N	N	D	W	R	P	Y	N	-	H	V	Q	S	I	I	E	D	A	W	A	R	G	E	Q	T	L	D	-	-	L	S	N	T	H	I	G	L	-	P	Y	T	I	N	F	S	N	L	T	Q	L	R	Q	P	-	-	S	G	P	R	S	I	R	R	T	Q	Q	A	-	-	-	-	-	-	P	Y	P	L	V	K
F	L	D	K	P	T	L	L	S	P	E	E	L	K	A	A	S	R	G	N	G	E	Y	A	W	Y	Y	E	G	R	-	-	-	-	-	N	G	W	W	Q	Y	D	E	R	T	S	R	E	L	E	D	A	F	S	K	G	K	K	N	T	E	M	L	I	A	-	-	-	-	G	F	-	L	Y	V	A	D	L	E	N	M	V	Q	Y	R	R	N	E	H	G	R	R	R	K	I	K	R	D	I	I	D	I	P	K	K	G	V	-	-	-	-	-	-

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F	L	D	K	P	T	L	L	S	P	E	E	L	K	A	A	S	R	G	N	G	E	Y	A	W	Y	Y	E	G	R	-	-	-	-	-	N	G	W	W	Q	Y	D	E	R	T	S	R	E	L	E	D	A	F	S	K	G	K	K	N	T	E	M	L	I	A	-	-	-	-	G	F	-	L	Y	V	A	D	L	E	N	M	V	Q	Y	R	R	N	E	H	G	R	R	R	K	I	K	R	D	I	I	D	I	P	K	K	G	V	-	-	-	-	-	-