PASS2.8 - Home

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x

beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x

hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x

                             10        20        30        40        50  
d1xoua-  (  31 )    dvidlfnklgvfqaailfayyqaqsdlnltttvnnsqleiqq-sntlnll
d1xoub-  (   2 )                              givsqtrnkelldkkirseieaik
                                                aaaaaaaaaaaaa   aaaaaa

                             60        70        80        90        100 
d1xoua-  ( 171 )    tsars-dqslqyrtisgisl                              
d1xoub-  (  26 )    kiiaefdvvkesvnelsekaktdpqAaeklnkliegytygeerklydsal
                    aaaaa   aaaaaaaaaa                                

                             110 
d1xoua-                       
d1xoub-  (  76 )    skieklietl

Domains
Outliers

Domain ID	Name	Family	Source	Domain	STRING-DB
d1xoua- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1xoua- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	Secreted protein EspA	EspA-like	Escherichia coli [TaxId: 562]		view
d1xoub- # Domain Specific Files ATM file: Atomic coordinates by ASTRAL ATM2ALI file: Amino acid sequences by ATM2ALI SST file: Secondary structure by SSTRUC PSA file: solvent accessibility by PSA HBD file: Hydrogen bonds by HBOND PSE file: PyMol session file for conserved interactions PDBSUM1: Topological diagram d1xoub- # Links to other databases and tools RCSB-PDB: Research Collaboratory for Structural Bioinformatics SCOP: Structural Classification of Proteins EBI: European Bioinformatics Institute HOMSTRAD: Homologous Structure Alignment Database DDBASE: Dial-Derived Domain Database CATH: Class Architecture Topology and Homologous sfily PALI: Phylogeny and ALIgnment of homologous protein structures MODBASE: A Database of Annotated Comparative Protein Structure Models 3Dee: A Database of Protein Domain Definition PQS: Protein Quaternary Structure Query Form at the EBI LPC/CSU: Ligand-Protein Contacts & Contacts of Structural LPFC: A Library of Protein Family Cores MMDB: Molecular Modelling DataBase,NCBI CE: Databases and Tools for 3-D Protein Structure Comparison and Alignment PDBSUM: Summaries and structural analyses of PDB data files Pfam: Protein families database of alignments and HMMs	EspA chaperone CesA	EspA chaperone CesA	Escherichia coli [TaxId: 562]		view

No outliers

Feature	Download
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

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D	V	I	D	L	F	N	K	L	G	V	F	Q	A	A	I	L	F	A	Y	Y	Q	A	Q	S	D	L	N	L	T	T	T	V	N	N	S	Q	L	E	I	Q	Q	-	S	N	T	L	N	L	L	T	S	A	R	S	-	D	Q	S	L	Q	Y	R	T	I	S	G	I	S	L	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	I	V	S	Q	T	R	N	K	E	L	L	D	K	K	I	R	S	E	I	E	A	I	K	K	I	I	A	E	F	D	V	V	K	E	S	V	N	E	L	S	E	K	A	K	T	D	P	Q	A	A	E	K	L	N	K	L	I	E	G	Y	T	Y	G	E	E	R	K	L	Y	D	S	A	L	S	K	I	E	K	L	I	E	T	L

Member	Chain	UniProtKB	GO term

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D	V	I	D	L	F	N	K	L	G	V	F	Q	A	A	I	L	F	A	Y	Y	Q	A	Q	S	D	L	N	L	T	T	T	V	N	N	S	Q	L	E	I	Q	Q	-	S	N	T	L	N	L	L	T	S	A	R	S	-	D	Q	S	L	Q	Y	R	T	I	S	G	I	S	L	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	I	V	S	Q	T	R	N	K	E	L	L	D	K	K	I	R	S	E	I	E	A	I	K	K	I	I	A	E	F	D	V	V	K	E	S	V	N	E	L	S	E	K	A	K	T	D	P	Q	A	A	E	K	L	N	K	L	I	E	G	Y	T	Y	G	E	E	R	K	L	Y	D	S	A	L	S	K	I	E	K	L	I	E	T	L

									10										20										30										40										50										60										70										80										90										100										110
D	V	I	D	L	F	N	K	L	G	V	F	Q	A	A	I	L	F	A	Y	Y	Q	A	Q	S	D	L	N	L	T	T	T	V	N	N	S	Q	L	E	I	Q	Q	-	S	N	T	L	N	L	L	T	S	A	R	S	-	D	Q	S	L	Q	Y	R	T	I	S	G	I	S	L	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	I	V	S	Q	T	R	N	K	E	L	L	D	K	K	I	R	S	E	I	E	A	I	K	K	I	I	A	E	F	D	V	V	K	E	S	V	N	E	L	S	E	K	A	K	T	D	P	Q	A	A	E	K	L	N	K	L	I	E	G	Y	T	Y	G	E	E	R	K	L	Y	D	S	A	L	S	K	I	E	K	L	I	E	T	L

									10										20										30										40										50										60										70										80										90										100										110
D	V	I	D	L	F	N	K	L	G	V	F	Q	A	A	I	L	F	A	Y	Y	Q	A	Q	S	D	L	N	L	T	T	T	V	N	N	S	Q	L	E	I	Q	Q	-	S	N	T	L	N	L	L	T	S	A	R	S	-	D	Q	S	L	Q	Y	R	T	I	S	G	I	S	L	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	I	V	S	Q	T	R	N	K	E	L	L	D	K	K	I	R	S	E	I	E	A	I	K	K	I	I	A	E	F	D	V	V	K	E	S	V	N	E	L	S	E	K	A	K	T	D	P	Q	A	A	E	K	L	N	K	L	I	E	G	Y	T	Y	G	E	E	R	K	L	Y	D	S	A	L	S	K	I	E	K	L	I	E	T	L