Superfamily : 101912 [ Sema domain ]
Class : All beta proteins
Fold : 7-bladed beta-propeller
# of Members : 3
solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla
positive phi: italic x
 
                             10        20        30        40        50  
d1olza2  (   3 )    fApipritwehrev----hLvqFhep-diynYsaLllsedkdtLyIGAre
d1q47a-  (  26 )    knnvprlklsykeMlesnNVitfnGlanSssYhtFlldeersrLYVGAkd
d6wvzm1  (  41 )                     yqlpnft----AtpIqnVilh---hhIFLGAtn
                                         bb          bbbb      bbbb   

                             60        70        80        90        100 
d1olza2  (  48 )    AVFAVnAlnIsekqhevywkVs---------------edkkakÇaekgks
d1q47a-  (  76 )    HIFSFnLvnIkdf-qkivWpvs---------------ytrrdeÇkwagkd
d6wvzm1  (  69 )    yIyvLeLvaeytgpvlehpdçfpçqdçsskanlsggv-------------
                    bbbbb                                             

                             110       120       130       140       150 
d1olza2  (  83 )    kqteÇlNYIrVLqpls-atsLyVÇGTnAFqPDhLnl----ts--Fkfl
d1q47a-  ( 110 )    ilkeÇANfIkVLeayn-qthLYAÇGTGAFhPTyIeVghhpedniFklq
d6wvzm1  ( 112 )    ----wdninmALvvdtyydqLISÇgsv--nGtÇqrhvfpnhtAqvhçIfs
                            bbbbbb     bbbbbb       bbbbb          b  

                             160       170       180       190       200 
d1olza2  ( 126 )    -gknedGkgrCPfdpahsytsvmVdgeLYSGTsyn---flgsepIIsRns
d1q47a-  ( 159 )    dshfenGrGkSPydpkllTASlLidgELYSGTAAd---fmgrdFAIfRTl
d6wvzm1  ( 164 )    pqieepsçpDçVVSal-gAkVlssvfnFfVGNtinssyfphpLhSSVRrl
                                       bbbb    bbbbb              bb  

                             210       220       230       240       250 
d1olza2  ( 172 )    s------hs-pLrTey-aipWLnePsFvfAdvirksp-geddrVYFFFTE
d1q47a-  ( 206 )    g------hhhpIrTeqhdsrWLndPrFIsAhlIpesdnpeddkVYFFFrE
d6wvzm1  ( 221 )    etdgFmfltqSyIdVlpfds--YpIkyvhAfesn-------nfiYFLTvQ
                                             bbbbbbbb         bbbbbbbb

                             260       270       280       290       300 
d1olza2  ( 217 )    vSvEyefvfrvlIPRIARkgDqGGlrtLqkkWTSFLKArLsrp-ds
d1q47a-  ( 250 )    naidgehsgkathArIGQknDfGGhrsLvnkWTTFLKArLiÇsvpgpn
d6wvzm1  ( 267 )    etla-----qtfhTRIIRFçSgL-----------hsymEMpLÇlt-----
                                bbbbbbbb                 bbbb         

                             310       320       330       340       350 
d1olza2  ( 266 )    g--lvFnvLrdVfVLrSpgl--------kvpvFYALFTPqln--nvglSA
d1q47a-  ( 300 )    gidthFdeLqdVflmnskdp--------knPiVYGVFTtssn--ifkgSA
d6wvzm1  ( 312 )    ---evFnILqAAyvsPGaqLArqigAslnddILFGVFAqspdsapmdrSA
                           bbbbbbbb                bbbbbbb          bb

                             360       370       380       390       400 
d1olza2  ( 304 )    VÇAYnLstAeevFshgkYmqsttveqshtkWvryngpvPkprPGaÇidse
d1q47a-  ( 340 )    VÇmYsMsdVrrvFl-gpYahrdgp---nyqwvpyqgrvpyprPGtÇPskt
d6wvzm1  ( 362 )    MÇAFPk-yvndfFnkvnvLqHfygpnhhçn------------------
                    bbbb   aaaaaa     bb                              

                             410       420       430       440       450 
d1olza2  ( 354 )    araanytsSlnLpdkTLqfVkdhPLMddsVtPidnrPrLikkd--vnYtq
d1q47a-  ( 386 )    --fggfdsTkdLpddVItfArshPaMynpVfPinnrPimiktdvnyqFtq
d6wvzm1  ( 403 )    ------------lnseadeyRtEFttaLqr---vDLfmgqFsevlLtS
                                                                   bbb

                             460       470       480       490       500 
d1olza2  ( 402 )    IVVdrtqaldgtvydvMFVSTdrGalHkAislehavhIieetqLFqdfep
d1q47a-  ( 434 )    IVVdrvdaed-gqydvMFIGTdvGtVLkvvs-----vLlEeMtVFreptt
d6wvzm1  ( 442 )    ISTfig-------lTiANLGTs-GrFMQVvVsrsgptphvnflLds-hpV
                    bbbb          bbbbbbb    bbbbb         bbb        

                             510       520       530  
d1olza2  ( 452 )    VqtLllSskkgnrfVYAGSnsgVVQapla     
d1q47a-  ( 489 )    IsaMelStk--qqqLYIGStaGVAQLpLhrcdiy
d6wvzm1  ( 487 )    speViVeh--nqngyTLVITgkITkIpL      
                        bb        bbbb    bbbbb       

 

 

Domain IDNameFamilySourceDomainSTRING-DB
Semaphorin 4dSema domainHuman (Homo sapiens) [TaxId: 9606]view
Semaphorin 3aSema domainMouse (Mus musculus) [TaxId: 10090]view
Hepatocyte growth factor receptorSema domainHuman (Homo sapiens) [TaxId: 9606]view

 

No outliers

FeatureDownload
Superfamily
Distance Matrix
Conserved Interactions
Cusp Results
Alistat - Alignment Statistics
SMotif - Conserved Structural Motifs
MeanRMS
PCSSE Details
Absolutely Conserved Residues
Highly Conserved Residues

 

10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530
F A P I P R I T W E H R E V - - - - H L V Q F H E P - D I Y N Y S A L L L S E D K D T L Y I G A R E A V F A V N A L N I S E K Q H E V Y W K V S - - - - - - - - - - - - - - - E D K K A K C A E K G K S K Q T E C L N Y I R V L Q P L S - A T S L Y V C G T N A F Q P A C D H L N L - - - - T S - - F K F L - G K N E D G K G R C P F D P A H S Y T S V M V D G E L Y S G T S Y N - - - F L G S E P I I S R N S S - - - - - - H S - P L R T E Y - A I P W L N E P S F V F A D V I R K S P - G E D D R V Y F F F T E V S V E Y E F V F R V L I P R I A R V C K G D Q G G L R T L Q K K W T S F L K A R L I C S R P - D S G - - L V F N V L R D V F V L R S P G L - - - - - - - - K V P V F Y A L F T P Q L N - - N V G L S A V C A Y N L S T A E E V F S H G K Y M Q S T T V E Q S H T K W V R Y N G P V P K P R P G A C I D S E A R A A N Y T S S L N L P D K T L Q F V K D H P L M D D S V T P I D N R P R L I K K D - - V N Y T Q I V V D R T Q A L D G T V Y D V M F V S T D R G A L H K A I S L E H A V H I I E E T Q L F Q D F E P V Q T L L L S S K K G N R F V Y A G S N S G V V Q A P L A - - - - -
K N N V P R L K L S Y K E M L E S N N V I T F N G L A N S S S Y H T F L L D E E R S R L Y V G A K D H I F S F N L V N I K D F - Q K I V W P V S - - - - - - - - - - - - - - - Y T R R D E C K W A G K D I L K E C A N F I K V L E A Y N - Q T H L Y A C G T G A F H P I C T Y I E V G H H P E D N I F K L Q D S H F E N G R G K S P Y D P K L L T A S L L I D G E L Y S G T A A D - - - F M G R D F A I F R T L G - - - - - - H H H P I R T E Q H D S R W L N D P R F I S A H L I P E S D N P E D D K V Y F F F R E N A I D G E H S G K A T H A R I G Q I C K N D F G G H R S L V N K W T T F L K A R L I C S V P G P N G I D T H F D E L Q D V F L M N S K D P - - - - - - - - K N P I V Y G V F T T S S N - - I F K G S A V C M Y S M S D V R R V F L - G P Y A H R D G P - - - N Y Q W V P Y Q G R V P Y P R P G T C P S K T - - F G G F D S T K D L P D D V I T F A R S H P A M Y N P V F P I N N R P I M I K T D V N Y Q F T Q I V V D R V D A E D - G Q Y D V M F I G T D V G T V L K V V S - - - - - V L L E E M T V F R E P T T I S A M E L S T K - - Q Q Q L Y I G S T A G V A Q L P L H R C D I Y
- - - - - - - - - - - - - - - - - Y Q L P N F T - - - - A T P I Q N V I L H - - - H H I F L G A T N Y I Y V L E L V A E Y T G P V L E H P D C F P C Q D C S S K A N L S G G V - - - - - - - - - - - - - - - - - W D N I N M A L V V D T Y Y D Q L I S C G S V - - N G T C Q R H V F P N H T A Q V H C I F S P Q I E E P S C P D C V V S A L - G A K V L S S V F N F F V G N T I N S S Y F P H P L H S S V R R L E T D G F M F L T Q S Y I D V L P F D S - - Y P I K Y V H A F E S N - - - - - - - N F I Y F L T V Q E T L A - - - - - Q T F H T R I I R F C S G L - - - - - - - - - - - H S Y M E M P L C L T - - - - - - - - E V F N I L Q A A Y V S P G A Q L A R Q I G A S L N D D I L F G V F A Q S P D S A P M D R S A M C A F P K - Y V N D F F N K V N V R C L Q H F Y G P N H H C N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L N S G C E A D E Y R T E F T T A L Q R - - - V D L F M G Q F S E V L L T S I S T F I G - - - - - - - L T I A N L G T S - G R F M Q V V V S R S G P T P H V N F L L D S - H P V S P E V I V E H - - N Q N G Y T L V I T G K I T K I P L - - - - - -

 

 

 

 

 

Member Chain UniProtKB GO term
d1olza2 A Q92854 GO:0030215
d1olza2 A Q92854 GO:0030215
d1q47a_ A O08665 GO:0030215