STIFDB - 1000bp Information | TAIR Gene ID: AT5G57090


STIFdb - 1000bp TFmap : AT5G57090

AT5G57090_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G57090

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.98030.493/ 24622 -292-287 Upstream regionForward
2 G_ABRE_bZIP 3.954620.937/ 24622 -932-925 Upstream regionForward
3 G_box_bHLH 3.57743.000/ 24622 -932-927 Upstream regionForward
4 Nac_box_NAC 3.03322.901/ 24622 -659-654 Upstream regionForward
5 Myb_box1_MYB 3.08351.214/ 24622 -292-287 Upstream regionForward
6 N_box_bHLH 2.90854.757/ 24622 -888-883 Upstream regionForward
7 HSE1_HSF 1.04511.086/ 24622 -241-234 Upstream regionForward
8 W_box_WRKY 1.63851.310/ 24622 -830-825 Upstream regionForward


Details about the Gene : AT5G57090:


TAIR IDAT5G57090
Alternate NamesEIR1, AGRAVITROPIC, AGRAVITROPIC 1, AGRAVITROPIC ROOT 1, PIN-FORMED 2, WAVY ROOTS 6, ETHYLENE INSENSITIVE ROOT 1, AUXIN TRANSPORT PROTEIN EIR1, POLAR-AUXIN-TRANSPORT EFFLUX COMPONENT AGRAVITROPIC 1, AGR, AGR1, ATPIN2, PIN2, WAV6
Chromosome Position23116919-23117990(chr5)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Nac_box_NAC
G_box_bHLH
N_box_bHLH
G_ABRE_bZIP
Experimental Data from
Microarray Database
DRASTIC-COLD, DRASTIC-NACL
References --


Download Sequence Data :

Click here to download AT5G57090 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012