STIFDB - Transcription Factor Information : Entry Name - G_ABRE_bZIP


Details about the Transcription Factor - G_ABRE_bZIP :

Transcription Factor Family NamebZIP
Sub-FamilyNil
Description

One group of transcription factors is defined by a basic leucine zipper (bZIP) motif. This bipartite DNA binding structure consists of a region enriched in basic amino acids (basic region) adjacent to a leucine zipper that is characterized by several leucine residues regularly spaced at seven-amino acid intervals. Whereas the basic region directly contacts the DNA, the leucine zipper mediates homodimerization and heterodimerization of protein monomers through a parallel interaction of the hydrophobic dimerization interfaces of two a-helices, resulting in a coiled-coil structure.The in-dividual base pairs are numbered encompassing the G-box from -4 to +4 (numbering from 5' to 3').The DNA binding specificity of GBF1 is strongly influenced by the nature of the nucleotides (positions -4, -3, +3, and +4) flanking the ACGT core sequence. For example, sequences that carry a TG at positions -4 and -3 and a T or G residue at position +4 are as efficiently bound by GBFl as the palindromic G-box.

Stress SignalsABA, DROUGHT
Name of Cis-ElementG/ABRE
Cis-Element(C/T)ACGTGGC
ReferencesHyung-in Choi.,et al.,2000. Journal of Biological Chemistry, 275(3): 1723-1730, Kazuo Shinozaki.,et al.,2000. Current Opinion in Plant Biology, 3:217-223.
Related Resources DATF : bZIP
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012