STIFDB - 1000bp Information | TAIR Gene ID: AT5G55640


STIFdb - 1000bp TFmap : AT5G55640

AT5G55640_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G55640

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.24810.911/ 24622 -410-405 Upstream regionForward
2 Myb_box5_MYB 2.24810.911/ 24622 -412-407 Upstream regionReverse
3 Myb_box5_MYB 2.24810.911/ 24622 -754-749 Upstream regionReverse
4 G_ABRE_bZIP 4.038512.884/ 24622 -116-109 Upstream regionForward
5 G_box_bHLH 3.65821.846/ 24622 -116-111 Upstream regionForward
6 GCC_box_AP2_EREBP 4.67744.958/ 24622 -55-50 Upstream regionReverse
7 DREB_AP2_EREBP 2.99051.987/ 24622 -103-98 Upstream regionForward
8 Nac_box_NAC 3.05281.785/ 24622 -762-757 Upstream regionReverse
9 Myb_box3_MYB 2.37081.339/ 24622 -48-43 Upstream regionReverse
10 Myb_box1_MYB 1.62130.747/ 24622 -48-43 Upstream regionReverse
11 HSE1_HSF 1.88060.668/ 24622 5158 5'UTRForward
12 W_box_WRKY 1.71411.612/ 24622 -708-703 Upstream regionReverse
13 W_box_WRKY 1.71411.612/ 24622 -605-600 Upstream regionForward


Details about the Gene : AT5G55640:


TAIR IDAT5G55640
Alternate NamesNIL(putative)
Chromosome Position22551344-22551150(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Nac_box_NAC
DREB_AP2_EREBP
G_box_bHLH
GCC_box_AP2_EREBP
G_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-DROUGHT
References --


Download Sequence Data :

Click here to download AT5G55640 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012