STIFDB - 1000bp Information | TAIR Gene ID: AT5G55120


STIFdb - 1000bp TFmap : AT5G55120

AT5G55120_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G55120

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.40300.978/ 5046 -751-746 Upstream region REVERSE
2 Myb_box3_MYB 1.88401.246/ 5046 -143-138 Upstream region REVERSE
3 Myb_box5_MYB 2.52250.792/ 5046 -903-898 Upstream region FORWARD
4 Myb_box5_MYB 2.52250.792/ 5046 -713-708 Upstream region REVERSE
5 Myb_box5_MYB 2.52250.792/ 5046 -109-104 Upstream region FORWARD
6 Myb_box1_MYB 2.56640.602/ 5046 -109-104 Upstream region FORWARD
7 W_box_WRKY 1.24700.652/ 5046 -134-129 Upstream region FORWARD
8 Myb_box2_MYB 2.53471.438/ 5046 5156 5`UTR FORWARD
9 G_box_bHLH 2.97361.502/ 5046 1924 5`UTR FORWARD
10 DREB_AP2_EREBP 2.40842.051/ 5046 -901-896 Upstream region FORWARD
11 C_ABRE_bZIP 3.40026.728/ 5046 -740-735 Upstream region FORWARD
12 N_box_bHLH 3.01785.021/ 5046 162167 5`UTR FORWARD
13 N_box_bHLH 3.01785.021/ 5046 185190 5`UTR FORWARD
14 Myb_box4_MYB 2.43192.827/ 5046 338344 5`UTR FORWARD
15 G_ABRE_bZIP 2.703810.194/ 5046 -826-819 Upstream region FORWARD


Details about the Gene : AT5G55120:


TAIR IDAT5G55120
Alternate NamesVTC5
Chromosome Position22369095-22371867 (chr5)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
DREB_AP2_EREBP
C_ABRE_bZIP
N_box_bHLH
Myb_box4_MYB
G_ABRE_bZIP
Experimental Data from
Microarray Database
GEO-UV-B
References --


Download Sequence Data :

Click here to download AT5G55120 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012