STIFDB - 1000bp Information | TAIR Gene ID: AT5G42650


STIFdb - 1000bp TFmap : AT5G42650

AT5G42650_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G42650

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.19710.987/ 24622 -242-237 Upstream regionReverse
2 Myb_box5_MYB 2.19710.987/ 24622 -640-635 Upstream regionForward
3 Myb_box5_MYB 2.19710.987/ 24622 -340-335 Upstream regionReverse
4 Myb_box5_MYB 2.19710.987/ 24622 -305-300 Upstream regionReverse
5 G_ABRE_bZIP 3.879810.469/ 24622 -206-199 Upstream regionForward
6 G_box_bHLH 3.55751.500/ 24622 -206-201 Upstream regionForward
7 DREB_AP2_EREBP 2.91351.615/ 24622 -618-613 Upstream regionReverse
8 G_box2_bZIP 2.36751.580/ 24622 -748-743 Upstream regionReverse
9 Myb_box3_MYB 2.31922.177/ 24622 -153-148 Upstream regionForward
10 Myb_box3_MYB 2.31922.177/ 24622 -691-686 Upstream regionForward
11 Myb_box1_MYB 1.59741.214/ 24622 -153-148 Upstream regionForward
12 Myb_box1_MYB 1.59741.214/ 24622 -691-686 Upstream regionForward
13 Myb_box4_MYB 2.91102.300/ 24622 -739-733 Upstream regionReverse
14 N_box_bHLH 3.55352.378/ 24622 -120-115 Upstream regionForward
15 HSE1_HSF 1.07450.543/ 24622 -132-125 Upstream regionForward
16 W_box_WRKY 1.65380.655/ 24622 -611-606 Upstream regionReverse


Details about the Gene : AT5G42650:


TAIR IDAT5G42650
Alternate NamesAOS, ALLENE OXIDASE SYNTHASE, ALLENE OXIDE SYNTHASE, CYP74A
Chromosome Position17116624-17116588(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
Myb_box4_MYB
G_ABRE_bZIP
Experimental Data from
Microarray Database
DRASTIC-DROUGHT
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT5G42650 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012