STIFDB - 1000bp Information | TAIR Gene ID: AT3G53620


STIFdb - 1000bp TFmap : AT3G53620

AT3G53620_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G53620

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.95210.304/ 24622 -212-207 Upstream regionReverse
2 G_ABRE_bZIP 3.744512.884/ 24622 -222-215 Upstream regionReverse
3 G_box_bHLH 3.45453.692/ 24622 -220-215 Upstream regionReverse
4 G_box_bHLH 3.45453.692/ 24622 -819-814 Upstream regionForward
5 GCC_box_AP2_EREBP 4.34454.958/ 24622 -80-75 Upstream regionReverse
6 DREB_AP2_EREBP 2.84313.975/ 24622 -104-99 Upstream regionReverse
7 DREB_AP2_EREBP 2.84313.975/ 24622 -266-261 Upstream regionForward
8 G_box2_bZIP 2.24801.945/ 24622 -281-276 Upstream regionReverse
9 Myb_box1_MYB 2.26740.747/ 24622 -160-155 Upstream regionForward
10 Myb_box4_MYB 2.77182.831/ 24622 -101-95 Upstream regionReverse
11 AuxRE_ARF 2.75401.059/ 24622 -58-53 Upstream regionForward
12 HSE1_HSF 0.96630.668/ 24622 3946 5'UTRForward
13 W_box_WRKY 2.25800.806/ 24622 -89-84 Upstream regionForward


Details about the Gene : AT3G53620:


TAIR IDAT3G53620
Alternate NamesNIL(putative)
Chromosome Position19890482-19892468(chr3)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
DREB_AP2_EREBP
G_box_bHLH
GCC_box_AP2_EREBP
Myb_box4_MYB
G_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-COLD
References --


Download Sequence Data :

Click here to download AT3G53620 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012