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STIFDB - 1000bp Information | TAIR Gene ID: AT1G52220

STIFdb - 1000bp TFmap : AT1G52220

AT1G52220_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT1G52220

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.93410.197/ 24622 -626-621 Upstream regionReverse
2 G_ABRE_bZIP 3.66038.375/ 24622 -94-87 Upstream regionForward
3 G_box_bHLH 3.31352.400/ 24622 -39-34 Upstream regionForward
4 G_box_bHLH 3.31352.400/ 24622 -94-89 Upstream regionForward
5 Nac_box_NAC 2.71721.160/ 24622 -567-562 Upstream regionReverse
6 Myb_box3_MYB 2.05721.741/ 24622 -935-930 Upstream regionForward
7 Myb_box3_MYB 2.05721.741/ 24622 -375-370 Upstream regionReverse
8 G_box1_bZIP 4.011126.194/ 24622 -40-33 Upstream regionForward
9 G_box1_bZIP 4.011126.194/ 24622 -95-88 Upstream regionForward
10 Myb_box1_MYB 1.28580.971/ 24622 -935-930 Upstream regionForward
11 Myb_box1_MYB 1.28580.971/ 24622 -375-370 Upstream regionReverse
12 Myb_box4_MYB 2.62051.840/ 24622 -390-384 Upstream regionReverse
13 N_box_bHLH 3.32591.903/ 24622 -252-247 Upstream regionForward
14 AuxRE_ARF 2.70032.753/ 24622 2126 5'UTRForward
15 AuxRE_ARF 2.70032.753/ 24622 1823 5'UTRReverse
16 AuxRE_ARF 2.70032.753/ 24622 -649-644 Upstream regionForward
17 AuxRE_ARF 2.70032.753/ 24622 -460-455 Upstream regionForward
18 HSE1_HSF 0.66611.303/ 24622 -130-123 Upstream regionForward
19 HSE1_HSF 0.66611.303/ 24622 -293-286 Upstream regionReverse
20 HSE1_HSF 0.66611.303/ 24622 -261-254 Upstream regionReverse

Details about the Gene : AT1G52220:


TAIR IDAT1G52220
Alternate NamesNIL(putative)
Chromosome Position19458367-19458275(chr1)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
Nac_box_NAC
G_box1_bZIP
G_box_bHLH
N_box_bHLH
Myb_box4_MYB
G_ABRE_bZIP
Experimental Data from
Microarray Database 		DRASTIC-COLD
References --

Download Sequence Data :

Click here to download AT1G52220 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012