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Pfam Domains mapped on to the structure: 2DYU

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00795 Carbon-nitrogen hydrolase PF00795 PF00795

Gene Ontology Annotations: 2DYU

No. GO ID GO Description Linkout - AmiGO
1 GO:0006807 nitrogen compound metabolic process GO:0006807

Conserved Domain Database Superfamily Annotations: 2DYU

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2DYU 143589 cd07565 aliphatic_amidase - cl11424
2 2DYU 212622 cl11424 nitrilase superfamily - -
3 2DYU 212622 cl11424 nitrilase superfamily - -
Structural Details of PDB entry 2DYU

Structural Details of PDB entry 2DYU

PDBid Chains Hinge Swapped Domain
2DYU A,B A:270-273,B:270-273;A:317-320,B:317-320 A:274-316,B:274-316

Swapped-domain interface residues and interactions:

Chains Residues
A 134, 135, 136, 138, 139, 142, 144, 145, 149, 170, 171, 177, 180, 181, 182, 268, 269, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 292, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 305, 307, 308, 309, 310, 311, 312, 314, 315, 316, 318, 319, 320, 327, 328, 329,
B 134, 135, 136, 138, 139, 142, 144, 145, 149, 170, 171, 177, 180, 182, 268, 269, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 292, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 305, 307, 308, 309, 310, 311, 312, 314, 315, 316, 320, 327, 328, 329,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 137, 140, 146, 167, 172, 173, 174, 176, 179, 196, 198, 199, 202, 203, 205, 206, 209, 210, 239, 267, 271, 272, 273, 317, 330, 332, 334,
B 137, 140, 146, 167, 172, 173, 174, 176, 179, 181, 196, 198, 199, 202, 203, 205, 206, 209, 210, 239, 267, 271, 272, 273, 317, 318, 332,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2DYU B:2DYU

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2DYU.ali
atm file:2DYU.atm
cof file:2DYU.cof
hbd file:2DYU.hbd
html file:2DYU.html
pdb file:2DYU.pdb
ps file:2DYU.ps
psa file:2DYU.psa
rtf file:2DYU.rtf
sst file:2DYU.sst
tem file:2DYU.tem