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Pfam Domains mapped on to the structure: 1F06

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01113 Dihydrodipicolinate reductase, N-terminus PF01113 PF01113
2 A PF01118 Semialdehyde dehydrogenase, NAD binding domain PF01118 PF01118

Gene Ontology Annotations: 1F06

No. GO ID GO Description Linkout - AmiGO
1 GO:0005737 cytoplasm GO:0005737

Conserved Domain Database Superfamily Annotations: 1F06

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1F06 212616 NADB_Rossmann superfamily C -
2 1F06 212616 NADB_Rossmann superfamily C -
Structural Details of PDB entry 1F06

Structural Details of PDB entry 1F06

PDBid Chains Hinge Swapped Domain
1F06 A,B A:303-308,B:303-308;A:803-820,B:803-820 A:309-320,B:309-320

Swapped-domain interface residues and interactions:

Chains Residues
A 309, 312, 313, 315, 316, 317, 319,
B 596, 625, 628, 629,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 20, 21, 24, 25, 92, 95, 96, 99, 123, 125, 126, 127, 128, 129, 130, 132, 133, 134, 135, 136, 137, 254, 255, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 272, 273, 276, 277, 280, 298, 299, 300, 301, 302, 303, 304, 305, 307, 308,
B 520, 521, 524, 525, 592, 595, 599, 623, 626, 627, 630, 632, 633, 634, 635, 636, 637, 754, 755, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 772, 773, 776, 777, 780, 798, 799, 800, 801, 802, 803, 804, 805, 807, 808, 809, 812, 813, 815, 816, 817, 819,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

B:1F06 A:1F06

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1F06.ali
atm file:1F06.atm
cof file:1F06.cof
hbd file:1F06.hbd
html file:1F06.html
pdb file:1F06.pdb
ps file:1F06.ps
psa file:1F06.psa
rtf file:1F06.rtf
sst file:1F06.sst
tem file:1F06.tem