Home | Browse | Search | Help | Blast | Group | Reference
 
 
 

STIFDB - Stress Responsive Genes in Chromosome - 12 from Oryza sativa subsp japonica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os12g0111000 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC PRE2_WRKY GEO-BACTERIAL BLIGHT,
2 Os12g0113500 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
3 Os12g0114800 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
4 Os12g0118200 Unavailable Nac_box_NAC GEO-BACTERIAL BLIGHT,GEO-HEAT,
5 Os12g0123800 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,
6 Os12g0129700 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
7 Os12g0132800 Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out). ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
8 Os12g0133700 Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-ABA,
9 Os12g0141500 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
10 Os12g0147200 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP OsIRO2_bHLH GEO-HEAT,
11 Os12g0149000 Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
12 Os12g0151000 Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH GEO-HEAT,
13 Os12g0152100 Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
14 Os12g0152600 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-DROUGHT,
15 Os12g0154700 Interacting selectively and non-covalently with manganese (Mn) ions. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
16 Os12g0155100 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-IRON ,
17 Os12g0168100 Unavailable ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,
18 Os12g0176300 Unavailable GEO-HEAT,
19 Os12g0179800 Interacting selectively and non-covalently with zinc (Zn) ions. ABRE_AB13_VP1 Nac_box_NAC ABRE_bZIP GEO-BACTERIAL BLIGHT,GEO-HEAT,
20 Os12g0187800 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH ABRE_bZIP GEO-DROUGHT,GEO-SALINITY,
21 Os12g0190000 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
22 Os12g0203200 Unavailable ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
23 Os12g0207000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,
24 Os12g0218300 Unavailable ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,
25 Os12g0226700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
26 Os12g0226900 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
27 Os12g0227500 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH GEO-DROUGHT,
28 Os12g0230200 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. ABRE_AB13_VP1 Nac_box_NAC GEO-IRON ,
29 Os12g0231000 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. GEO-HEAT,
30 Os12g0242100 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
31 Os12g0247700 Unavailable ABRE_AB13_VP1 OsIRO2_bHLH GEO-BACTERIAL BLIGHT,GEO-HEAT,
32 Os12g0258700 Interacting selectively and non-covalently with copper (Cu) ions. DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
33 Os12g0260500 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
34 Os12g0271700 Unavailable DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH GEO-IRON ,
35 Os12g0282000 Unavailable ABRE_AB13_VP1 Nac_box_NAC GEO-IRON ,
36 Os12g0282400 Unavailable ABRE_AB13_VP1 ABRE_bZIP GEO-IRON ,
37 Os12g0291100 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. GEO-IRON ,
38 Os12g0292400 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-IRON ,
39 Os12g0431100 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
40 Os12g0437800 Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain a serine residue (and a histidine residue) are at the active center of the enzyme. ABRE_AB13_VP1 GEO-HEAT,
41 Os12g0438600 Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH GEO-HEAT,
42 Os12g0448400 Unavailable DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
43 Os12g0448900 Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
44 Os12g0458100 Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,GEO-HEAT,
45 Os12g0472800 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
46 Os12g0477400 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). GEO-DROUGHT,
47 Os12g0491800 Interacting selectively and non-covalently with magnesium (Mg) ions. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH GEO-BACTERIAL BLIGHT,
48 Os12g0493900 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
49 Os12g0498500 Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock. GEO-IRON ,
50 Os12g0503000 Combining with a thromboxane (TXA) to initiate a change in cell activity. ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,GEO-HEAT,
51 Os12g0512100 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
52 Os12g0516900 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH PRE4_WRKY GEO-IRON ,
53 Os12g0518200 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
54 Os12g0538700 Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system. ABRE_AB13_VP1 GEO-HEAT,
55 Os12g0541700 Unavailable ABRE_AB13_VP1 GEO-HEAT,
56 Os12g0546800 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-IRON ,
57 Os12g0548300 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
58 Os12g0555200 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
59 Os12g0555600 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-IRON ,
60 Os12g0567800 Interacting selectively and non-covalently with any metal ion. ABRE_AB13_VP1 GEO-SALINITY,
61 Os12g0568500 Interacting selectively and non-covalently with any metal ion. GEO-SALINITY,
62 Os12g0570700 Interacting selectively and non-covalently with any metal ion. ABRE_AB13_VP1 GEO-HEAT,
63 Os12g0577600 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
64 Os12g0583300 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC PRE4_WRKY GEO-HEAT,
65 Os12g0586100 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
66 Os12g0609500 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-BACTERIAL BLIGHT,
67 Os12g0628600 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. ABRE_AB13_VP1 GEO-HEAT,
68 Os12g0633600 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. ABRE_AB13_VP1 ABRE_bZIP G_box1_bZIP GEO-BACTERIAL BLIGHT,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012