STIFDB - Stress Responsive Genes in Chromosome - 12 from Oryza sativa subsp indica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os12g0105700 The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts freely permeable to most ions and metabolites. GEO-SALINITY,GEO- ,
2 Os12g0113500 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC GEO-SALINITY,GEO- ,
3 Os12g0115100 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
4 Os12g0118200 Unavailable Nac_box_NAC GEO-DROUGHT,GEO- ,
5 Os12g0125000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
6 Os12g0128800 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
7 Os12g0135800 Unavailable GEO-SALINITY,GEO- ,
8 Os12g0143800 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
9 Os12g0147200 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
10 Os12g0148700 The action of a molecule that contributes to the structural integrity of the ribosome. G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
11 Os12g0151000 Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
12 Os12g0153200 Unavailable GEO-DROUGHT,GEO-SALINITY,GEO- ,
13 Os12g0165200 Unavailable GEO-SALINITY,GEO- ,
14 Os12g0168100 Unavailable Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
15 Os12g0176200 Interacting selectively and non-covalently with iron (Fe) ions. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
16 Os12g0179800 Unavailable Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
17 Os12g0198700 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
18 Os12g0206800 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
19 Os12g0207000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
20 Os12g0218300 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
21 Os12g0230200 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. Nac_box_NAC GEO-COLD,GEO-SALINITY,GEO- ,
22 Os12g0231000 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. GEO-SALINITY,GEO- ,
23 Os12g0237900 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. Nac_box_NAC GEO-SALINITY,GEO- ,
24 Os12g0242100 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
25 Os12g0242700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-SALINITY,GEO- ,
26 Os12g0244000 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
27 Os12g0244800 Unavailable DREB_AP2_EREBP GEO-COLD,GEO- ,
28 Os12g0247700 Unavailable GEO-DROUGHT,GEO-SALINITY,GEO- ,
29 Os12g0258700 Interacting selectively and non-covalently with copper (Cu) ions. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
30 Os12g0268000 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. Nac_box_NAC GEO-DROUGHT,GEO- ,
31 Os12g0276300 Unavailable GEO-SALINITY,GEO- ,
32 Os12g0282000 Unavailable Nac_box_NAC GEO-COLD,GEO- ,
33 Os12g0283400 Stops, prevents or reduces the activity of an enzyme. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
34 Os12g0418600 Unavailable DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
35 Os12g0428000 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
36 Os12g0431100 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
37 Os12g0432600 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). Nac_box_NAC GEO-SALINITY,GEO- ,
38 Os12g0437800 Unavailable GEO-SALINITY,GEO- ,
39 Os12g0438400 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
40 Os12g0438600 Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
41 Os12g0448400 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
42 Os12g0448900 Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. Nac_box_NAC GEO-SALINITY,GEO- ,
43 Os12g0467700 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-SALINITY,GEO- ,
44 Os12g0486900 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. Nac_box_NAC GEO-SALINITY,GEO- ,
45 Os12g0493900 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. DREB_AP2_EREBP GEO-COLD,GEO- ,
46 Os12g0503000 Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: allantoin(out) + H+(out) = allantoin(in) + H+(in) by secondary active transport. Nac_box_NAC GEO-SALINITY,GEO- ,
47 Os12g0506500 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
48 Os12g0512100 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
49 Os12g0516000 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
50 Os12g0520200 Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate. Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
51 Os12g0546800 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
52 Os12g0547600 Unavailable Nac_box_NAC GEO-COLD,GEO- ,
53 Os12g0551200 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO- ,
54 Os12g0552900 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
55 Os12g0555000 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
56 Os12g0555200 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
57 Os12g0555500 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
58 Os12g0556400 Unavailable GEO-SALINITY,GEO- ,
59 Os12g0556500 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
60 Os12g0559100 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
61 Os12g0559200 Interacting selectively and non-covalently with iron (Fe) ions. GEO-SALINITY,GEO- ,
62 Os12g0564100 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC ABRE_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
63 Os12g0570700 Interacting selectively and non-covalently with any metal ion. GEO-SALINITY,GEO- ,
64 Os12g0573900 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
65 Os12g0574400 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. Nac_box_NAC GEO-COLD,GEO- ,
66 Os12g0578700 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
67 Os12g0582800 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
68 Os12g0583700 The living contents of a cell the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
69 Os12g0592900 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
70 Os12g0602200 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
71 Os12g0607800 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
72 Os12g0610200 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. Nac_box_NAC GEO-SALINITY,GEO- ,
73 Os12g0616800 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
74 Os12g0617400 Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. GEO-DROUGHT,GEO-SALINITY,GEO- ,
75 Os12g0621600 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
76 Os12g0628600 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. GEO-SALINITY,GEO- ,
77 Os12g0629700 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
78 Os12g0630100 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
79 Os12g0630200 Unavailable GEO-SALINITY,GEO- ,
80 Os12g0631600 Unavailable GEO-DROUGHT,GEO-SALINITY,GEO- ,
81 Os12g0633600 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. ABRE_bZIP G_box1_bZIP GEO-DROUGHT,GEO- ,
82 Os12g0640500 Unavailable GEO-SALINITY,GEO- ,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012