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STIFDB - Stress Responsive Genes in Chromosome - 09 from Oryza sativa subsp japonica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os09g0116400 The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. DREB_AP2_EREBP OsIRO2_bHLH ABRE_bZIP GEO-HEAT,
2 Os09g0132900 Unavailable ABRE_AB13_VP1 GEO-IRON ,
3 Os09g0240200 The living contents of a cell the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
4 Os09g0255400 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-HEAT,
5 Os09g0256700 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
6 Os09g0272500 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
7 Os09g0292900 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
8 Os09g0294000 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 GEO-HEAT,
9 Os09g0307300 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
10 Os09g0319800 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
11 Os09g0324200 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP PRE4_WRKY GEO-BACTERIAL BLIGHT,
12 Os09g0344500 Catalysis of the transfer of a methyl group to an acceptor molecule. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-IRON ,
13 Os09g0364400 The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell. ABRE_AB13_VP1 GEO-DROUGHT,
14 Os09g0369500 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
15 Os09g0378700 A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC ABRE_bZIP G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,
16 Os09g0381400 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
17 Os09g0382400 Unavailable ABRE_AB13_VP1 GEO-HEAT,
18 Os09g0421700 Interacting selectively and non-covalently with any nucleic acid. DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH ABRE_bZIP GEO-HEAT,
19 Os09g0426100 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
20 Os09g0438100 Unavailable ABRE_AB13_VP1 G_box1_bZIP GEO-BACTERIAL BLIGHT,GEO-HEAT,
21 Os09g0439500 A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. ABRE_AB13_VP1 Nac_box_NAC GEO-IRON ,
22 Os09g0444900 Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
23 Os09g0453300 Interacting selectively and non-covalently with calcium ions (Ca2+). ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
24 Os09g0458700 Unavailable ABRE_AB13_VP1 Nac_box_NAC GEO-DROUGHT,
25 Os09g0459900 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
26 Os09g0460300 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
27 Os09g0461500 Unavailable ABRE_AB13_VP1 ABRE_bZIP GEO-HEAT,
28 Os09g0466400 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
29 Os09g0472900 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. ABRE_AB13_VP1 Nac_box_NAC GEO-IRON ,
30 Os09g0481800 Interacting selectively and non-covalently with iron (Fe) ions. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,GEO-IRON ,
31 Os09g0484900 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
32 Os09g0491100 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,GEO-IRON ,
33 Os09g0504700 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-ABA,
34 Os09g0509500 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-ABA,
35 Os09g0517900 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
36 Os09g0520800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
37 Os09g0522000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). GEO-IRON ,
38 Os09g0522100 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 GEO-COLD,
39 Os09g0526600 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,GEO-HEAT,GEO-IRON ,
40 Os09g0535200 The action of a molecule that contributes to the structural integrity of the ribosome. DREB_AP2_EREBP GEO-HEAT,
41 Os09g0537700 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
42 Os09g0540400 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
43 Os09g0543900 Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). ABRE_AB13_VP1 GEO-HEAT,
44 Os09g0546900 Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,GEO-HEAT,
45 Os09g0547100 Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. ABRE_AB13_VP1 DREB_AP2_EREBP ABRE_bZIP GEO-IRON ,
46 Os09g0553900 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
47 Os09g0555400 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP OsIRO2_bHLH ABRE_bZIP PRE4_WRKY GEO-BACTERIAL BLIGHT,
48 Os09g0558900 Interacting selectively and non-covalently with iron (Fe) ions. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
49 Os09g0560000 The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
50 Os09g0562700 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. GEO-BACTERIAL BLIGHT,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012