STIFDB - Stress Responsive Genes in Chromosome - 09 from Oryza sativa subsp indica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os09g0115900 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
2 Os09g0123500 The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
3 Os09g0125900 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-SALINITY,GEO- ,
4 Os09g0127700 Unavailable Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
5 Os09g0130300 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
6 Os09g0240500 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
7 Os09g0243200 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
8 Os09g0255400 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-DROUGHT,GEO-SALINITY,GEO- ,
9 Os09g0256700 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
10 Os09g0266100 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
11 Os09g0268300 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. GEO-SALINITY,GEO- ,
12 Os09g0272000 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
13 Os09g0272900 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
14 Os09g0273800 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). GEO-SALINITY,GEO- ,
15 Os09g0275400 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. GEO-SALINITY,GEO- ,
16 Os09g0290900 Unavailable GEO-SALINITY,GEO- ,
17 Os09g0322300 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
18 Os09g0324400 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
19 Os09g0325700 Interacting selectively and non-covalently with magnesium (Mg) ions. Nac_box_NAC ABRE_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
20 Os09g0330200 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
21 Os09g0333500 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. Nac_box_NAC GEO-COLD,GEO-DROUGHT,GEO- ,
22 Os09g0341500 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
23 Os09g0341600 Unavailable Nac_box_NAC GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
24 Os09g0343200 Interacting selectively and non-covalently with the sevenless (sev) protein, a receptor tyrosine kinase. Nac_box_NAC GEO-SALINITY,GEO- ,
25 Os09g0343400 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
26 Os09g0350900 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
27 Os09g0355400 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
28 Os09g0364800 Unavailable GEO-COLD,GEO- ,
29 Os09g0367700 Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. GEO-SALINITY,GEO- ,
30 Os09g0368500 Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
31 Os09g0369500 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. GEO-SALINITY,GEO- ,
32 Os09g0371000 Unavailable GEO-DROUGHT,GEO- ,
33 Os09g0394600 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
34 Os09g0396900 The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
35 Os09g0398300 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
36 Os09g0400600 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
37 Os09g0413600 The action of a molecule that contributes to the structural integrity of the ribosome. DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
38 Os09g0417600 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-SALINITY,GEO- ,
39 Os09g0417800 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
40 Os09g0421200 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-COLD,GEO- ,
41 Os09g0426000 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
42 Os09g0426800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
43 Os09g0427100 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
44 Os09g0433900 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
45 Os09g0438000 Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
46 Os09g0440300 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
47 Os09g0442100 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO- ,
48 Os09g0442600 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-DROUGHT,GEO-SALINITY,GEO- ,
49 Os09g0445600 Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex. ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
50 Os09g0448200 Catalysis of the transfer of potassium ions (K+) from one side of a membrane to the other. Nac_box_NAC GEO-SALINITY,GEO- ,
51 Os09g0450700 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
52 Os09g0452900 A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
53 Os09g0454600 The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. GEO-DROUGHT,GEO-SALINITY,GEO- ,
54 Os09g0455300 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. GEO-DROUGHT,GEO-SALINITY,GEO- ,
55 Os09g0457400 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-COLD,GEO- ,
56 Os09g0457900 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
57 Os09g0458600 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
58 Os09g0460300 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
59 Os09g0467300 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
60 Os09g0471400 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-COLD,GEO- ,
61 Os09g0471600 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
62 Os09g0478600 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
63 Os09g0479800 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
64 Os09g0482200 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
65 Os09g0482640 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
66 Os09g0482840 Interacting selectively and non-covalently with calcium ions (Ca2+). DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO- ,
67 Os09g0483500 Interacting selectively and non-covalently with calcium ions (Ca2+). ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
68 Os09g0484900 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
69 Os09g0491740 Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. GEO-DROUGHT,GEO-SALINITY,GEO- ,
70 Os09g0493000 Unavailable DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
71 Os09g0498700 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
72 Os09g0507300 Interacting selectively and non-covalently with copper (Cu) ions. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
73 Os09g0509100 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). GEO-DROUGHT,GEO-SALINITY,GEO- ,
74 Os09g0510500 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
75 Os09g0517100 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. ABRE_bZIP GEO-SALINITY,GEO- ,
76 Os09g0522000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). GEO-COLD,GEO-SALINITY,GEO- ,
77 Os09g0522200 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
78 Os09g0526600 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). GEO-DROUGHT,GEO-SALINITY,GEO- ,
79 Os09g0532000 Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid. GEO-DROUGHT,GEO-SALINITY,GEO- ,
80 Os09g0537700 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
81 Os09g0542900 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO- ,
82 Os09g0543100 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
83 Os09g0543900 Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). GEO-DROUGHT,GEO-SALINITY,GEO- ,
84 Os09g0545000 Unavailable ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
85 Os09g0547800 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
86 Os09g0552500 Functions in the storage of nutritious substrates. Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
87 Os09g0552600 Functions in the storage of nutritious substrates. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
88 Os09g0553900 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
89 Os09g0555500 Unavailable Nac_box_NAC DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
90 Os09g0559600 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
91 Os09g0560800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-SALINITY,GEO- ,
92 Os09g0561600 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC GEO-SALINITY,GEO- ,
93 Os09g0567100 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
94 Os09g0568700 Interacting selectively and non-covalently with manganese (Mn) ions. GEO-SALINITY,GEO- ,
95 Os09g0572400 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
96 Os09g0572500 Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
97 Os09g0572700 Interacting selectively and non-covalently with copper (Cu) ions. Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
98 Os09g0573100 Unavailable DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012