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STIFDB - Stress Responsive Genes in Chromosome - 08 from Oryza sativa subsp japonica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os08g0101700 Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-IRON ,
2 Os08g0104600 Interacting selectively and non-covalently with iron (Fe) ions. ABRE_AB13_VP1 Nac_box_NAC OsIRO2_bHLH ABRE_bZIP GEO-HEAT,GEO-IRON ,
3 Os08g0109300 Catalysis of the reaction: ATP + AMP = 2 ADP. ABRE_AB13_VP1 GEO-HEAT,
4 Os08g0110600 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. ABRE_AB13_VP1 GEO-ABA,GEO-DROUGHT,GEO-SALINITY,
5 Os08g0113900 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
6 Os08g0120900 Unavailable ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
7 Os08g0129800 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
8 Os08g0135800 Interacting selectively and non-covalently with any nucleic acid. DREB_AP2_EREBP GEO-IRON ,
9 Os08g0137800 Interacting selectively and non-covalently with copper (Cu) ions. DREB_AP2_EREBP GEO-HEAT,
10 Os08g0139100 Interacting selectively and non-covalently with ice, water reduced to the solid state by cold temperature. It is a white or transparent colorless substance, crystalline, brittle, and viscoidal. DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
11 Os08g0140300 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
12 Os08g0144000 Interacting selectively and non-covalently with any nucleic acid. ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,
13 Os08g0161800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 GEO-IRON ,
14 Os08g0162400 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). GEO-IRON ,
15 Os08g0164000 Unavailable ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
16 Os08g0168000 Interacting selectively and non-covalently with magnesium (Mg) ions. ABRE_AB13_VP1 Nac_box_NAC GEO-IRON ,
17 Os08g0172800 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP GEO-IRON ,
18 Os08g0174300 Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). ABRE_AB13_VP1 GEO-DROUGHT,
19 Os08g0175300 Interacting selectively and non-covalently with any nucleic acid. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
20 Os08g0200300 Unavailable OsIRO2_bHLH GEO-IRON ,
21 Os08g0200600 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
22 Os08g0207300 Unavailable DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
23 Os08g0208200 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. GEO-HEAT,
24 Os08g0218700 Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-IRON ,
25 Os08g0263100 Unavailable ABRE_AB13_VP1 OsIRO2_bHLH GEO-HEAT,
26 Os08g0269700 Unavailable ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
27 Os08g0273000 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
28 Os08g0277200 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
29 Os08g0280100 Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH GEO-HEAT,
30 Os08g0327700 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
31 Os08g0332700 Unavailable DREB_AP2_EREBP Nac_box_NAC GEO-IRON ,
32 Os08g0349300 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-BACTERIAL BLIGHT,
33 Os08g0385000 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP OsIRO2_bHLH ABRE_bZIP GEO-BACTERIAL BLIGHT,GEO-HEAT,
34 Os08g0414200 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). DREB_AP2_EREBP GEO-HEAT,
35 Os08g0414700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-HEAT,
36 Os08g0415600 A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex. G_box1_bZIP GEO-DROUGHT,
37 Os08g0418600 Unavailable PRE4_WRKY GEO-BACTERIAL BLIGHT,
38 Os08g0421800 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,GEO-HEAT,
39 Os08g0425100 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. ABRE_AB13_VP1 G_box1_bZIP GEO-IRON ,
40 Os08g0428100 Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,
41 Os08g0431900 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_AB13_VP1 DREB_AP2_EREBP GEO-BACTERIAL BLIGHT,
42 Os08g0435900 A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-IRON ,
43 Os08g0460000 Interacting selectively and non-covalently with manganese (Mn) ions. ABRE_AB13_VP1 Nac_box_NAC GEO-HEAT,
44 Os08g0473900 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC OsIRO2_bHLH ABRE_bZIP GEO-HEAT,
45 Os08g0481000 Unavailable GEO-BACTERIAL BLIGHT,
46 Os08g0481100 Unavailable GEO-ABA,
47 Os08g0482600 Interacting selectively and non-covalently with copper (Cu) ions. ABRE_AB13_VP1 Nac_box_NAC GEO-BACTERIAL BLIGHT,
48 Os08g0483200 Interacting selectively and non-covalently with any nucleic acid. ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
49 Os08g0483600 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-IRON ,
50 Os08g0485400 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-HEAT,
51 Os08g0486700 Unavailable ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-ABA,
52 Os08g0489300 Unavailable DREB_AP2_EREBP GEO-HEAT,
53 Os08g0501300 Unavailable ABRE_AB13_VP1 PRE4_WRKY GEO-HEAT,
54 Os08g0506000 Unavailable ABRE_AB13_VP1 OsIRO2_bHLH ABRE_bZIP GEO-HEAT,
55 Os08g0517300 Interacting selectively and non-covalently with zinc (Zn) ions. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC GEO-HEAT,
56 Os08g0518800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_AB13_VP1 DREB_AP2_EREBP GEO-HEAT,
57 Os08g0520600 Unavailable GEO-DROUGHT,GEO-SALINITY,
58 Os08g0531300 Unavailable ABRE_AB13_VP1 GEO-IRON ,
59 Os08g0531900 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP OsIRO2_bHLH GEO-BACTERIAL BLIGHT,
60 Os08g0535200 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. ABRE_AB13_VP1 GEO-BACTERIAL BLIGHT,
61 Os08g0543900 Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex. ABRE_AB13_VP1 GEO-DROUGHT,
62 Os08g0565800 Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system. ABRE_AB13_VP1 DREB_AP2_EREBP Nac_box_NAC ABRE_bZIP GEO-HEAT,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012