STIFDB - Stress Responsive Genes in Chromosome - 08 from Oryza sativa subsp indica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os08g0105800 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO- ,
2 Os08g0109000 Unavailable Nac_box_NAC GEO-DROUGHT,GEO- ,
3 Os08g0112300 Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). GEO-DROUGHT,GEO-SALINITY,GEO- ,
4 Os08g0113900 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
5 Os08g0114300 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-COLD,GEO- ,
6 Os08g0116700 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
7 Os08g0120500 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
8 Os08g0120600 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-DROUGHT,GEO-SALINITY,GEO- ,
9 Os08g0122400 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
10 Os08g0122700 Unavailable DREB_AP2_EREBP G_box1_bZIP GEO-SALINITY,GEO- ,
11 Os08g0124500 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-COLD,GEO- ,
12 Os08g0125200 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-SALINITY,GEO- ,
13 Os08g0125300 Interacting selectively and non-covalently with any nucleic acid. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
14 Os08g0128000 A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
15 Os08g0131000 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. GEO-SALINITY,GEO- ,
16 Os08g0135800 Interacting selectively and non-covalently with any nucleic acid. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
17 Os08g0136300 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
18 Os08g0136500 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
19 Os08g0136800 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
20 Os08g0137800 Interacting selectively and non-covalently with copper (Cu) ions. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
21 Os08g0153900 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
22 Os08g0158200 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-SALINITY,GEO- ,
23 Os08g0160500 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
24 Os08g0163800 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
25 Os08g0168000 Interacting selectively and non-covalently with magnesium (Mg) ions. Nac_box_NAC GEO-SALINITY,GEO- ,
26 Os08g0172300 The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
27 Os08g0173600 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
28 Os08g0178200 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
29 Os08g0178800 Interacting selectively and non-covalently with zinc (Zn) ions. DREB_AP2_EREBP GEO-COLD,GEO- ,
30 Os08g0182400 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
31 Os08g0189200 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
32 Os08g0197500 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO- ,
33 Os08g0201500 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
34 Os08g0203700 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. Nac_box_NAC GEO-SALINITY,GEO- ,
35 Os08g0218700 Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
36 Os08g0238200 Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
37 Os08g0240800 Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
38 Os08g0242400 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
39 Os08g0246300 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). DREB_AP2_EREBP GEO-SALINITY,GEO- ,
40 Os08g0248100 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
41 Os08g0262500 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. Nac_box_NAC GEO-SALINITY,GEO- ,
42 Os08g0263100 Unavailable GEO-SALINITY,GEO- ,
43 Os08g0267800 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
44 Os08g0277200 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
45 Os08g0293100 Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. DREB_AP2_EREBP GEO-COLD,GEO- ,
46 Os08g0324200 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
47 Os08g0327700 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
48 Os08g0351300 Unavailable Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-SALINITY,GEO- ,
49 Os08g0367400 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
50 Os08g0374600 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
51 Os08g0379300 Unavailable Nac_box_NAC GEO-DROUGHT,GEO- ,
52 Os08g0385000 Unavailable ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
53 Os08g0396700 Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
54 Os08g0402500 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO- ,
55 Os08g0404500 Interacting selectively and non-covalently with zinc (Zn) ions. GEO-COLD,GEO- ,
56 Os08g0408500 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO- ,
57 Os08g0412700 Unavailable Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
58 Os08g0412800 Unavailable Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
59 Os08g0414700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
60 Os08g0418600 Unavailable GEO-SALINITY,GEO- ,
61 Os08g0425800 Unavailable ABRE_bZIP DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO- ,
62 Os08g0434100 Interacting selectively and non-covalently with an RNA molecule or a portion thereof. Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
63 Os08g0435800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
64 Os08g0438600 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
65 Os08g0439100 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
66 Os08g0440300 Interacting selectively and non-covalently with any nucleic acid. GEO-SALINITY,GEO- ,
67 Os08g0442900 Interacting selectively and non-covalently with GTP, guanosine triphosphate. Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
68 Os08g0445700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO- ,
69 Os08g0447900 Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. GEO-SALINITY,GEO- ,
70 Os08g0448100 Unavailable DREB_AP2_EREBP GEO-COLD,GEO- ,
71 Os08g0451800 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). Nac_box_NAC GEO-SALINITY,GEO- ,
72 Os08g0457400 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
73 Os08g0458200 Unavailable GEO-SALINITY,GEO- ,
74 Os08g0458600 Responds to a two-component sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
75 Os08g0461400 Unavailable DREB_AP2_EREBP G_box1_bZIP GEO-SALINITY,GEO- ,
76 Os08g0467500 Unavailable Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
77 Os08g0472000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
78 Os08g0472800 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
79 Os08g0473900 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
80 Os08g0474000 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_bZIP DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
81 Os08g0476300 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-DROUGHT,GEO- ,
82 Os08g0477500 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
83 Os08g0482600 Interacting selectively and non-covalently with copper (Cu) ions. Nac_box_NAC GEO-SALINITY,GEO- ,
84 Os08g0485400 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
85 Os08g0491400 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
86 Os08g0492500 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
87 Os08g0498400 Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO- ,
88 Os08g0499700 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
89 Os08g0502600 Interacting selectively and non-covalently with calcium ions (Ca2+). DREB_AP2_EREBP GEO-SALINITY,GEO- ,
90 Os08g0502700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
91 Os08g0504700 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO- ,
92 Os08g0508000 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. GEO-DROUGHT,GEO-SALINITY,GEO- ,
93 Os08g0508800 Interacting selectively and non-covalently with iron (Fe) ions. GEO-DROUGHT,GEO-SALINITY,GEO- ,
94 Os08g0509100 Interacting selectively and non-covalently with iron (Fe) ions. DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
95 Os08g0510300 Unavailable GEO-SALINITY,GEO- ,
96 Os08g0517100 Unavailable GEO-SALINITY,GEO- ,
97 Os08g0518800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
98 Os08g0518900 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-SALINITY,GEO- ,
99 Os08g0519100 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-SALINITY,GEO- ,
100 Os08g0521600 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). ABRE_bZIP DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO- ,
101 Os08g0535400 Interacting selectively and non-covalently with zinc (Zn) ions. Nac_box_NAC GEO-SALINITY,GEO- ,
102 Os08g0536800 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. GEO-DROUGHT,GEO- ,
103 Os08g0540400 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC GEO-COLD,GEO-DROUGHT,GEO- ,
104 Os08g0544700 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
105 Os08g0545800 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
106 Os08g0546800 Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex. Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
107 Os08g0558100 Interacting selectively and non-covalently with calcium ions (Ca2+). GEO-DROUGHT,GEO- ,
108 Os08g0565200 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC ABRE_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012