STIFDB - Stress Responsive Genes in Chromosome - 07 from Oryza sativa subsp indica:

No. TAIR IDGenes DescriptionResponsive Transcription FactorStress Elements
1 Os07g0100600 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. Nac_box_NAC ABRE_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
2 Os07g0106700 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
3 Os07g0108800 Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
4 Os07g0115500 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
5 Os07g0119300 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-SALINITY,GEO- ,
6 Os07g0119800 Unavailable Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
7 Os07g0129200 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. GEO-SALINITY,GEO- ,
8 Os07g0136400 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
9 Os07g0147600 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
10 Os07g0154100 Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
11 Os07g0162900 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
12 Os07g0177100 The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. Nac_box_NAC GEO-SALINITY,GEO- ,
13 Os07g0177200 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. ABRE_bZIP DREB_AP2_EREBP G_box1_bZIP GEO-COLD,GEO-DROUGHT,GEO- ,
14 Os07g0186000 All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. GEO-DROUGHT,GEO- ,
15 Os07g0188700 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles may be a single or double lipid bilayer also includes associated proteins. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
16 Os07g0192000 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
17 Os07g0209100 Unavailable Nac_box_NAC DREB_AP2_EREBP G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
18 Os07g0210000 A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. GEO-SALINITY,GEO- ,
19 Os07g0212400 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
20 Os07g0213300 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
21 Os07g0214300 Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain a serine residue (and a histidine residue) are at the active center of the enzyme. GEO-SALINITY,GEO- ,
22 Os07g0219300 A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol. GEO-SALINITY,GEO- ,
23 Os07g0242000 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
24 Os07g0245100 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-DROUGHT,GEO- ,
25 Os07g0247000 Stops, prevents or reduces the activity of an enzyme. GEO-COLD,GEO-SALINITY,GEO- ,
26 Os07g0258400 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
27 Os07g0272300 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
28 Os07g0288700 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
29 Os07g0290200 Interacting selectively and non-covalently with a lipid. Nac_box_NAC GEO-SALINITY,GEO- ,
30 Os07g0407700 Unavailable DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
31 Os07g0407900 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
32 Os07g0417200 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
33 Os07g0418500 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
34 Os07g0418700 Functions in the storage of nutritious substrates. Nac_box_NAC GEO-SALINITY,GEO- ,
35 Os07g0419300 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
36 Os07g0422100 Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
37 Os07g0439100 Unavailable Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
38 Os07g0445600 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
39 Os07g0475900 Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
40 Os07g0480900 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
41 Os07g0484200 Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
42 Os07g0517900 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
43 Os07g0521300 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC GEO-SALINITY,GEO- ,
44 Os07g0521600 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). Nac_box_NAC GEO-SALINITY,GEO- ,
45 Os07g0523600 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. GEO-COLD,GEO- ,
46 Os07g0526600 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
47 Os07g0529000 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
48 Os07g0531200 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
49 Os07g0532500 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
50 Os07g0534700 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. DREB_AP2_EREBP GEO-COLD,GEO-SALINITY,GEO- ,
51 Os07g0535200 Unavailable DREB_AP2_EREBP GEO-SALINITY,GEO- ,
52 Os07g0537900 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
53 Os07g0538400 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
54 Os07g0538700 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
55 Os07g0539900 Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. GEO-SALINITY,GEO- ,
56 Os07g0550600 Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). G_box1_bZIP GEO-DROUGHT,GEO-SALINITY,GEO- ,
57 Os07g0550900 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-SALINITY,GEO- ,
58 Os07g0551400 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
59 Os07g0554900 Unavailable GEO-SALINITY,GEO- ,
60 Os07g0558100 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
61 Os07g0559700 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO- ,
62 Os07g0561300 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
63 Os07g0561800 Unavailable DREB_AP2_EREBP GEO-COLD,GEO- ,
64 Os07g0562400 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. GEO-SALINITY,GEO- ,
65 Os07g0563400 Interacting selectively and non-covalently with ice, water reduced to the solid state by cold temperature. It is a white or transparent colorless substance, crystalline, brittle, and viscoidal. Nac_box_NAC ABRE_bZIP GEO-DROUGHT,GEO- ,
66 Os07g0564100 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
67 Os07g0564500 Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
68 Os07g0566500 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
69 Os07g0568700 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
70 Os07g0568800 Unavailable Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
71 Os07g0573200 Unavailable GEO-DROUGHT,GEO- ,
72 Os07g0578300 Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). Nac_box_NAC GEO-SALINITY,GEO- ,
73 Os07g0580200 Unavailable GEO-COLD,GEO- ,
74 Os07g0582700 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO- ,
75 Os07g0586100 Unavailable GEO-DROUGHT,GEO-SALINITY,GEO- ,
76 Os07g0592000 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
77 Os07g0592100 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
78 Os07g0599300 Unavailable Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
79 Os07g0604600 Unavailable GEO-COLD,GEO- ,
80 Os07g0605800 Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate. GEO-SALINITY,GEO- ,
81 Os07g0614400 Unavailable Nac_box_NAC GEO-SALINITY,GEO- ,
82 Os07g0615500 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
83 Os07g0622700 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. ABRE_bZIP DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
84 Os07g0624600 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
85 Os07g0626200 Unavailable DREB_AP2_EREBP GEO-COLD,GEO- ,
86 Os07g0631200 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). DREB_AP2_EREBP GEO-SALINITY,GEO- ,
87 Os07g0633200 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. Nac_box_NAC GEO-DROUGHT,GEO-SALINITY,GEO- ,
88 Os07g0635300 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. DREB_AP2_EREBP GEO-SALINITY,GEO- ,
89 Os07g0635500 Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water. Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO-SALINITY,GEO- ,
90 Os07g0638100 Unavailable GEO-DROUGHT,GEO-SALINITY,GEO- ,
91 Os07g0638500 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
92 Os07g0646800 Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
93 Os07g0655600 The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin in fungi it is composed largely of polysaccharides in bacteria it is composed of peptidoglycan. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
94 Os07g0656200 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-DROUGHT,GEO- ,
95 Os07g0660500 Unavailable GEO-SALINITY,GEO- ,
96 Os07g0661400 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-COLD,GEO-DROUGHT,GEO- ,
97 Os07g0661600 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). DREB_AP2_EREBP GEO-SALINITY,GEO- ,
98 Os07g0663800 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
99 Os07g0664600 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. GEO-DROUGHT,GEO-SALINITY,GEO- ,
100 Os07g0666900 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
101 Os07g0668200 A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. Nac_box_NAC GEO-COLD,GEO- ,
102 Os07g0673900 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
103 Os07g0674800 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
104 Os07g0677400 Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
105 Os07g0685700 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
106 Os07g0686600 Unavailable DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
107 Os07g0686800 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. GEO-SALINITY,GEO- ,
108 Os07g0687300 Unavailable GEO-SALINITY,GEO- ,
109 Os07g0687900 Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO-SALINITY,GEO- ,
110 Os07g0688200 Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid). Nac_box_NAC DREB_AP2_EREBP GEO-SALINITY,GEO- ,
111 Os07g0691300 Unavailable Nac_box_NAC DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
112 Os07g0691600 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. Nac_box_NAC ABRE_bZIP GEO-SALINITY,GEO- ,
113 Os07g0695400 Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. DREB_AP2_EREBP GEO-DROUGHT,GEO- ,
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012