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STIFDB - 1000bp Information | RAPDB Gene ID: Os05g0149000

STIFdb - 1000bp TFmap : Os05g0149000

Os05g0149000_1000.png

Details of 1000bp TFmap | RAPDB Gene ID: Os05g0149000

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 ABRE_AB13_VP1 2.09601.162/ 4515 -246-242 Upstream region REVERSE
2 ABRE_AB13_VP1 2.09601.162/ 4515 553557 5`UTR FORWARD
3 ABRE_AB13_VP1 2.09601.162/ 4515 542546 5`UTR FORWARD
4 ABRE_AB13_VP1 2.09601.162/ 4515 -132-128 Upstream region FORWARD
5 ABRE_AB13_VP1 2.09601.162/ 4515 -45-41 Upstream region FORWARD
6 ABRE_AB13_VP1 2.09601.162/ 4515 -577-573 Upstream region REVERSE
7 ABRE_AB13_VP1 2.09601.162/ 4515 -49-45 Upstream region FORWARD
8 DREB_AP2_EREBP 1.87890.905/ 4515 -852-847 Upstream region REVERSE
9 DREB_AP2_EREBP 1.87890.905/ 4515 -772-767 Upstream region REVERSE
10 Nac_box_NAC 1.96770.576/ 4515 305310 5`UTR REVERSE
11 OsIRO2_bHLH 2.70342.094/ 4515 -366-360 Upstream region REVERSE

Details about the Gene : Os05g0149000:


RAPDB IDOs05g0149000
Alternate NamesNIL(putative)
Chromosome Position2803667-2804961 (chr5)
Transcription FactorsABRE_AB13_VP1
DREB_AP2_EREBP
Nac_box_NAC
OsIRO2_bHLH
Experimental Data from
Microarray Database 		GEO-BACTERIAL BLIGHT,
References --

Download Sequence Data :

Click here to download Os05g0149000 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012