STIFDB - 1000bp Information | TAIR Gene ID: AT5G62900


STIFdb - 1000bp TFmap : AT5G62900

AT5G62900_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G62900

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.65411.480/ 24622 -677-672 Upstream regionForward
2 Myb_box5_MYB 1.65411.480/ 24622 -825-820 Upstream regionForward
3 Myb_box5_MYB 1.65411.480/ 24622 -245-240 Upstream regionReverse
4 GCC_box_AP2_EREBP 5.01758.057/ 24622 5459 5'UTRReverse
5 DREB_AP2_EREBP 3.26783.230/ 24622 -302-297 Upstream regionReverse
6 AuxRE_ARF 3.19561.720/ 24622 -281-276 Upstream regionReverse
7 Nac_box_NAC 3.21902.901/ 24622 -998-993 Upstream regionForward
8 HSE1_HSF 1.26721.086/ 24622 -316-309 Upstream regionForward


Details about the Gene : AT5G62900:


TAIR IDAT5G62900
Alternate NamesNIL(putative)
Chromosome Position25265023-25266097(chr5)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-COLD, RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G62900 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012