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STIFDB - 1000bp Information | TAIR Gene ID: AT5G59550

STIFdb - 1000bp TFmap : AT5G59550

AT5G59550_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G59550

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.73320.699/ 5046 7176 5`UTR REVERSE
2 Myb_box3_MYB 2.20602.670/ 5046 -759-754 Upstream region REVERSE
3 Myb_box3_MYB 2.20602.670/ 5046 -820-815 Upstream region REVERSE
4 Myb_box3_MYB 2.20602.670/ 5046 -597-592 Upstream region REVERSE
5 HSE1_HSF 0.13690.436/ 5046 -131-124 Upstream region FORWARD
6 Myb_box5_MYB 1.29640.942/ 5046 -413-408 Upstream region REVERSE
7 Myb_box5_MYB 1.29640.942/ 5046 -70-65 Upstream region FORWARD
8 Myb_box5_MYB 1.29640.942/ 5046 -820-815 Upstream region REVERSE
9 Myb_box5_MYB 1.29640.942/ 5046 -759-754 Upstream region REVERSE
10 Myb_box5_MYB 1.29640.942/ 5046 -597-592 Upstream region REVERSE
11 Myb_box1_MYB 1.46671.290/ 5046 -759-754 Upstream region REVERSE
12 Myb_box1_MYB 1.46671.290/ 5046 -820-815 Upstream region REVERSE
13 Myb_box1_MYB 1.46671.290/ 5046 -597-592 Upstream region REVERSE
14 W_box_WRKY 1.46191.397/ 5046 -1000-995 Upstream region REVERSE
15 W_box_WRKY 1.46191.397/ 5046 -836-831 Upstream region FORWARD
16 W_box_WRKY 1.46191.397/ 5046 -717-712 Upstream region REVERSE
17 Myb_box2_MYB 2.80121.027/ 5046 -379-374 Upstream region REVERSE
18 G_box_bHLH 3.44011.073/ 5046 -22-17 Upstream region FORWARD
19 G_box2_bZIP 2.20762.322/ 5046 -824-819 Upstream region REVERSE
20 G_box2_bZIP 2.20762.322/ 5046 -264-259 Upstream region REVERSE
21 N_box_bHLH 3.44911.793/ 5046 -146-141 Upstream region FORWARD

Details about the Gene : AT5G59550:


TAIR IDAT5G59550
Alternate NamesNIL(putative)
Chromosome Position23998259-23999793 (chr5)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
G_box2_bZIP
N_box_bHLH
Experimental Data from
Microarray Database 		GEO-LIGHT
References --

Download Sequence Data :

Click here to download AT5G59550 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012