STIFDB - 1000bp Information | TAIR Gene ID: AT5G58330


STIFdb - 1000bp TFmap : AT5G58330

AT5G58330_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G58330

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.69370.526/ 24622 -238-233 Upstream regionReverse
2 Myb_box5_MYB 1.69370.526/ 24622 -838-833 Upstream regionReverse
3 Myb_box2_MYB 2.43921.459/ 24622 -537-532 Upstream regionReverse
4 G_box2_bZIP 1.82571.685/ 24622 -326-321 Upstream regionReverse
5 Nac_box_NAC 2.52711.547/ 24622 -708-703 Upstream regionReverse
6 Myb_box3_MYB 1.80451.161/ 24622 -76-71 Upstream regionForward
7 Myb_box1_MYB 1.82010.647/ 24622 -838-833 Upstream regionReverse
8 Myb_box4_MYB 2.36097.361/ 24622 -582-576 Upstream regionReverse
9 Myb_box4_MYB 2.36097.361/ 24622 1319 5'UTRReverse
10 Myb_box4_MYB 2.36097.361/ 24622 -948-942 Upstream regionReverse
11 AuxRE_ARF 2.39032.753/ 24622 3237 5'UTRReverse
12 AuxRE_ARF 2.39032.753/ 24622 -845-840 Upstream regionReverse
13 AuxRE_ARF 2.39032.753/ 24622 -956-951 Upstream regionForward
14 HSE1_HSF 1.14620.579/ 24622 -431-424 Upstream regionForward
15 W_box_WRKY 1.87620.698/ 24622 6570 5'UTRReverse


Details about the Gene : AT5G58330:


TAIR IDAT5G58330
Alternate NamesNIL(putative)
Chromosome Position23599622-23599514(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-COLD, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G58330 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012