STIFDB - 1000bp Information | TAIR Gene ID: AT5G57930


STIFdb - 1000bp TFmap : AT5G57930

AT5G57930_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G57930

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.10401.974/ 24622 7277 5'UTRReverse
2 Myb_box5_MYB 2.10401.974/ 24622 -730-725 Upstream regionForward
3 Myb_box5_MYB 2.10401.974/ 24622 7479 5'UTRForward
4 Myb_box5_MYB 2.10401.974/ 24622 -513-508 Upstream regionForward
5 Myb_box5_MYB 2.10401.974/ 24622 -329-324 Upstream regionReverse
6 Myb_box5_MYB 2.10401.974/ 24622 -648-643 Upstream regionReverse
7 Myb_box5_MYB 2.10401.974/ 24622 -456-451 Upstream regionForward
8 Myb_box5_MYB 2.10401.974/ 24622 -253-248 Upstream regionReverse
9 Myb_box5_MYB 2.10401.974/ 24622 -114-109 Upstream regionForward
10 Myb_box1_MYB 2.16591.079/ 24622 -114-109 Upstream regionForward
11 Myb_box1_MYB 2.16591.079/ 24622 7479 5'UTRForward
12 AuxRE_ARF 2.77433.823/ 24622 -203-198 Upstream regionReverse
13 AuxRE_ARF 2.77433.823/ 24622 -469-464 Upstream regionForward
14 AuxRE_ARF 2.77433.823/ 24622 -767-762 Upstream regionReverse
15 AuxRE_ARF 2.77433.823/ 24622 -802-797 Upstream regionReverse
16 AuxRE_ARF 2.77433.823/ 24622 -526-521 Upstream regionForward
17 W_box_WRKY 1.37880.582/ 24622 -784-779 Upstream regionForward
18 HSE1_HSF 1.54110.483/ 24622 -546-539 Upstream regionForward


Details about the Gene : AT5G57930:


TAIR IDAT5G57930
Alternate NamesAPO2, ACCUMULATION OF PHOTOSYSTEM ONE 2, EMBRYO DEFECTIVE 1629, EMB1629
Chromosome Position23470830-23471915(chr5)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G57930 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012